Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BJK08_RS09900 | Genome accession | NZ_CP017602 |
| Coordinates | 2200944..2201258 (-) | Length | 104 a.a. |
| NCBI ID | WP_027229196.1 | Uniprot ID | A0A2S6EXS5 |
| Organism | Legionella pneumophila strain D5945 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2195944..2206258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJK08_RS09875 (BJK08_09745) | - | 2196353..2196853 (-) | 501 | WP_027229191.1 | hypothetical protein | - |
| BJK08_RS09880 (BJK08_09750) | - | 2197345..2198205 (+) | 861 | WP_027229192.1 | polysaccharide deacetylase family protein | - |
| BJK08_RS09885 (BJK08_09755) | - | 2198339..2199535 (-) | 1197 | WP_027229193.1 | murein transglycosylase A | - |
| BJK08_RS09890 (BJK08_09760) | lpp1976 | 2199645..2200202 (-) | 558 | WP_027229194.1 | hypothetical protein | Machinery gene |
| BJK08_RS09895 (BJK08_09765) | lpp1977 | 2200199..2200942 (-) | 744 | WP_027229195.1 | PilW family protein | Machinery gene |
| BJK08_RS09900 (BJK08_09770) | lpp1978 | 2200944..2201258 (-) | 315 | WP_027229196.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BJK08_RS09905 (BJK08_09775) | hisC | 2201419..2202528 (+) | 1110 | WP_027229197.1 | histidinol-phosphate transaminase | - |
| BJK08_RS09910 (BJK08_09780) | - | 2202566..2202907 (+) | 342 | WP_027229198.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BJK08_RS09915 (BJK08_09785) | secF | 2203082..2203999 (-) | 918 | WP_027229199.1 | protein translocase subunit SecF | - |
| BJK08_RS09920 (BJK08_09790) | secD | 2204012..2205868 (-) | 1857 | WP_027229200.1 | protein translocase subunit SecD | - |
| BJK08_RS09925 (BJK08_09795) | yajC | 2205890..2206225 (-) | 336 | WP_027229201.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12391.56 Da Isoelectric Point: 9.5369
>NTDB_id=200690 BJK08_RS09900 WP_027229196.1 2200944..2201258(-) (lpp1978) [Legionella pneumophila strain D5945]
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
Nucleotide
Download Length: 315 bp
>NTDB_id=200690 BJK08_RS09900 WP_027229196.1 2200944..2201258(-) (lpp1978) [Legionella pneumophila strain D5945]
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
90.385 |
100 |
0.904 |
| lpp1978 | Legionella pneumophila str. Paris |
90.385 |
100 |
0.904 |