Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | BSBS38_RS06365 | Genome accession | NZ_CP017314 |
| Coordinates | 1226831..1227784 (+) | Length | 317 a.a. |
| NCBI ID | WP_069837427.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain BS38 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1221831..1232784
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSBS38_RS06330 (BSBS38_01280) | argF | 1222372..1223331 (+) | 960 | WP_014479432.1 | ornithine carbamoyltransferase | - |
| BSBS38_RS06345 (BSBS38_01283) | yjzC | 1224707..1224886 (+) | 180 | WP_003245356.1 | YjzC family protein | - |
| BSBS38_RS06350 (BSBS38_01284) | yjzD | 1224933..1225118 (-) | 186 | WP_003245236.1 | YjzD family protein | - |
| BSBS38_RS06355 (BSBS38_01285) | - | 1225367..1226101 (+) | 735 | WP_014479433.1 | hypothetical protein | - |
| BSBS38_RS06360 (BSBS38_01286) | - | 1226183..1226740 (+) | 558 | WP_014479435.1 | hypothetical protein | - |
| BSBS38_RS06365 (BSBS38_01287) | med | 1226831..1227784 (+) | 954 | WP_069837427.1 | transcriptional regulator Med | Regulator |
| BSBS38_RS06370 (BSBS38_01288) | comZ | 1227799..1227990 (+) | 192 | WP_046380930.1 | ComG operon transcriptional repressor ComZ | Regulator |
| BSBS38_RS06375 (BSBS38_01289) | yjzB | 1228020..1228259 (-) | 240 | WP_003232972.1 | spore coat protein YjzB | - |
| BSBS38_RS06380 (BSBS38_01290) | fabH | 1228424..1229362 (+) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| BSBS38_RS06385 (BSBS38_01291) | fabF | 1229385..1230626 (+) | 1242 | WP_003244890.1 | beta-ketoacyl-ACP synthase II | - |
| BSBS38_RS06390 (BSBS38_01292) | yjaZ | 1230702..1231487 (+) | 786 | WP_014479439.1 | DUF2268 domain-containing protein | - |
| BSBS38_RS06395 (BSBS38_01293) | appD | 1231679..1232665 (+) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.84 Da Isoelectric Point: 4.6031
>NTDB_id=197604 BSBS38_RS06365 WP_069837427.1 1226831..1227784(+) (med) [Bacillus subtilis strain BS38]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=197604 BSBS38_RS06365 WP_069837427.1 1226831..1227784(+) (med) [Bacillus subtilis strain BS38]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
99.685 |
100 |
0.997 |