Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BFV68_RS07695 Genome accession   NZ_CP017179
Coordinates   1657356..1657982 (+) Length   208 a.a.
NCBI ID   WP_069595742.1    Uniprot ID   -
Organism   Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1652356..1662982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFV68_RS07675 (BFV68_07675) - 1652755..1654515 (-) 1761 WP_017384808.1 AAA family ATPase -
  BFV68_RS07680 (BFV68_07680) matP 1654702..1655154 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  BFV68_RS07685 (BFV68_07685) ompA 1655220..1656272 (-) 1053 WP_108376575.1 porin OmpA -
  BFV68_RS07690 (BFV68_07690) sulA 1656629..1657138 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  BFV68_RS07695 (BFV68_07695) sxy/tfoX 1657356..1657982 (+) 627 WP_069595742.1 TfoX/Sxy family DNA transformation protein Regulator
  BFV68_RS07700 (BFV68_07700) yccS 1657939..1660101 (-) 2163 WP_069595744.1 YccS family putative transporter -
  BFV68_RS07705 (BFV68_07705) - 1660120..1660566 (-) 447 WP_015570894.1 YccF domain-containing protein -
  BFV68_RS07710 (BFV68_07710) helD 1660689..1662743 (+) 2055 WP_069595745.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.60 Da        Isoelectric Point: 9.4592

>NTDB_id=196359 BFV68_RS07695 WP_069595742.1 1657356..1657982(+) (sxy/tfoX) [Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKIRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=196359 BFV68_RS07695 WP_069595742.1 1657356..1657982(+) (sxy/tfoX) [Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATACGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment