Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CDG41_RS02725 | Genome accession | NZ_CP021774 |
| Coordinates | 584365..584730 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain Pa124 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 579365..589730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG41_RS02695 (CDG41_02690) | pyrR | 579987..580499 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CDG41_RS02700 (CDG41_02695) | ruvX | 580611..581045 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CDG41_RS02705 (CDG41_02700) | - | 581045..581614 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CDG41_RS02710 (CDG41_02705) | - | 581663..582556 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| CDG41_RS02715 (CDG41_02710) | gshB | 582703..583656 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| CDG41_RS02720 (CDG41_02715) | pilG | 583911..584318 (+) | 408 | WP_087930942.1 | twitching motility response regulator PilG | Regulator |
| CDG41_RS02725 (CDG41_02720) | pilH | 584365..584730 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CDG41_RS02730 (CDG41_02725) | - | 584781..585317 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CDG41_RS02735 (CDG41_02730) | pilJ | 585402..587450 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CDG41_RS02740 (CDG41_02735) | pilK | 587511..588386 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=196283 CDG41_RS02725 WP_003084587.1 584365..584730(+) (pilH) [Pseudomonas aeruginosa strain Pa124]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=196283 CDG41_RS02725 WP_003084587.1 584365..584730(+) (pilH) [Pseudomonas aeruginosa strain Pa124]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |