Detailed information NTG0196268

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CCZ24_RS10910
• Genome accession: NZ_CP021773
• Coordinates: 2104003..2105112 (-)
• Length: 369 a.a.
• NCBI ID: WP_000264866.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain B105
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2099003..2110112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCZ24_RS10885 (CCZ24_10745)	-	2099518..2100198 (+)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-
CCZ24_RS10890 (CCZ24_10750)	-	2100208..2100693 (+)	486	WP_001034427.1	arginine repressor	-
CCZ24_RS10895 (CCZ24_10755)	guaB	2100850..2102331 (+)	1482	WP_000073444.1	IMP dehydrogenase	-
CCZ24_RS10900 (CCZ24_10760)	-	2102407..2103069 (+)	663	WP_001869051.1	helix-turn-helix transcriptional regulator	-
CCZ24_RS10905 (CCZ24_10765)	-	2103125..2103991 (+)	867	WP_000398683.1	GRP family sugar transporter	-
CCZ24_RS10910 (CCZ24_10770)	recF	2104003..2105112 (-)	1110	WP_000264866.1	DNA replication/repair protein RecF	Machinery gene
CCZ24_RS10915 (CCZ24_10775)	yaaA	2105115..2105468 (-)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CCZ24_RS10920 (CCZ24_10780)	-	2105707..2106951 (+)	1245	WP_000706193.1	pitrilysin family protein	-
CCZ24_RS10925 (CCZ24_10785)	-	2106953..2108236 (+)	1284	WP_000217762.1	pitrilysin family protein	-
CCZ24_RS10930 (CCZ24_10790)	pgsA	2108359..2108901 (+)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CCZ24_RS10935 (CCZ24_10795)	-	2108901..2109740 (+)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42502.29 Da
• Isoelectric Point: 7.3132

>NTDB_id=196268 CCZ24_RS10910 WP_000264866.1 2104003..2105112(-) (recF) [Streptococcus agalactiae strain B105]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKSTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=196268 CCZ24_RS10910 WP_000264866.1 2104003..2105112(-) (recF) [Streptococcus agalactiae strain B105]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGTCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444