Detailed information NTG0196100

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DU202_RS09150
• Genome accession: NZ_CP017152
• Coordinates: 1865908..1866609 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii DU202
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1860908..1871609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DU202_RS09115 (DU202_01843)	kdsB	1861431..1862192 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DU202_RS09120 (DU202_01844)	-	1862204..1863184 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
DU202_RS09125 (DU202_01845)	-	1863196..1863537 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
DU202_RS09130 (DU202_01846)	-	1863555..1864328 (+)	774	WP_000497298.1	TatD family hydrolase	-
DU202_RS09135 (DU202_01847)	-	1864366..1864974 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DU202_RS09140 (DU202_01848)	-	1864984..1865538 (+)	555	WP_000841373.1	type II secretion system protein	-
DU202_RS09145 (DU202_01849)	xcpV	1865528..1865908 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
DU202_RS09150 (DU202_01850)	xcpW	1865908..1866609 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DU202_RS09155 (DU202_01851)	gspK	1866609..1867568 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
DU202_RS09160 (DU202_01852)	-	1867799..1868395 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
DU202_RS09165 (DU202_01853)	ung	1868446..1869159 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
DU202_RS09170 (DU202_01854)	-	1869156..1870280 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DU202_RS09175 (DU202_01855)	tadA	1870287..1870790 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
DU202_RS09180 (DU202_01856)	-	1870860..1871303 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=196100 DU202_RS09150 WP_000594589.1 1865908..1866609(+) (xcpW) [Acinetobacter baumannii DU202]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=196100 DU202_RS09150 WP_000594589.1 1865908..1866609(+) (xcpW) [Acinetobacter baumannii DU202]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996