Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   BGL51_RS03310 Genome accession   NZ_CP017064
Coordinates   618272..619273 (+) Length   333 a.a.
NCBI ID   WP_004197422.1    Uniprot ID   Q9L6X0
Organism   Streptococcus thermophilus strain ST3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 613272..624273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGL51_RS03290 (BGL51_03315) smpB 614376..614840 (+) 465 WP_002950240.1 SsrA-binding protein SmpB -
  BGL51_RS03295 (BGL51_03320) - 614994..616400 (+) 1407 WP_095559289.1 Cof-type HAD-IIB family hydrolase -
  BGL51_RS03300 (BGL51_03325) - 616402..616767 (+) 366 WP_002950243.1 S1 RNA-binding domain-containing protein -
  BGL51_RS03305 (BGL51_03330) - 616870..617955 (-) 1086 WP_011225703.1 M24 family metallopeptidase -
  BGL51_RS03310 (BGL51_03335) ccpA 618272..619273 (+) 1002 WP_004197422.1 catabolite control protein A Regulator
  BGL51_RS03315 - 619332..619529 (+) 198 WP_014608125.1 hypothetical protein -
  BGL51_RS10475 - 619635..619859 (+) 225 WP_224102938.1 MmcQ/YjbR family DNA-binding protein -
  BGL51_RS03320 (BGL51_03340) - 619860..620399 (+) 540 WP_011680936.1 MmcQ/YjbR family DNA-binding protein -
  BGL51_RS03325 (BGL51_03345) - 620412..621527 (+) 1116 WP_011680937.1 glycerate kinase -
  BGL51_RS03330 (BGL51_03350) - 621574..622029 (-) 456 WP_095559290.1 YueI family protein -
  BGL51_RS03335 (BGL51_03355) eno 622237..623541 (+) 1305 WP_011225708.1 surface-displayed alpha-enolase -
  BGL51_RS03340 (BGL51_03360) - 623696..623880 (-) 185 Protein_592 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36597.53 Da        Isoelectric Point: 5.8841

>NTDB_id=194970 BGL51_RS03310 WP_004197422.1 618272..619273(+) (ccpA) [Streptococcus thermophilus strain ST3]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIVNSYFA
TLAKGIDDIATMYKYNIVLASSDDNEDHEVTVIHSLISKQVDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDCVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFELAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVTSYTRPNLSSINHPLYDLGAVSMRMLTKIMHKEELEDKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=194970 BGL51_RS03310 WP_004197422.1 618272..619273(+) (ccpA) [Streptococcus thermophilus strain ST3]
ATGAATACTGATGAAACAATCACAATTTATGATGTAGCGCGTGAAGCTGGAGTATCGATGGCAACTGTTTCTCGTGTTGT
AAATGGTAACAAAAACGTAAAAGAAAACACCCGAAAAAAAGTGCTCGAAGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCAAGTAAAAAAACAACTACTGTAGGAGTTGTCATTCCAAATATTGTAAATAGCTATTTTGCT
ACTCTAGCTAAAGGTATTGATGACATTGCAACCATGTATAAGTATAATATTGTTCTTGCTTCCAGTGATGATAATGAGGA
TCATGAAGTTACAGTCATTCATTCTCTAATTTCTAAACAAGTTGATGGTATTATTTTTATGGGACACCATCTGACAGAAA
AAATCCGTGCAGAATTCTCTCGTACCCGTACACCGATTGTTCTAGCAGGAACAGTTGATCTCGAACACCAATTACCAAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTGTGTAACGCAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTACGTTTGGCCGGGTATAAGTCTGGACTTGAAAAGAATAATTTGAGCT
ACAACGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGAGTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGATTTCGAAATCATCACAAGCAATGATTCACCGGTTACAAGCTACACACGTCCAAACCTTTCTAGTATAAACCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATTATGCATAAGGAAGAACTTGAAGATAAAGACGTT
ATTCTTAATCATGGTCTAACTTTACGCCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9L6X0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

76.276

100

0.763

  ccpA Streptococcus pneumoniae D39

75.375

100

0.754

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547


Multiple sequence alignment