Detailed information NTG0194680

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MTVDSCj13_RS05890
• Genome accession: NZ_CP017032
• Coordinates: 1116848..1117807 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter jejuni subsp. jejuni strain MTVDSCj13
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1111848..1122807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTVDSCj13_RS05865 (MTVDSCj13_1140)	neuC	1112437..1113561 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
MTVDSCj13_RS09265 (MTVDSCj13_1141)	-	1113554..1114501 (+)	948	Protein_1128	beta-1,4-N-acetylgalactosaminyltransferase	-
MTVDSCj13_RS05875 (MTVDSCj13_1142)	-	1114498..1115163 (+)	666	WP_002935341.1	acylneuraminate cytidylyltransferase family protein	-
MTVDSCj13_RS05880 (MTVDSCj13_1143)	-	1115287..1115985 (+)	699	WP_228589016.1	CatB-related O-acetyltransferase	-
MTVDSCj13_RS05885 (MTVDSCj13_1144)	waaV	1115977..1116789 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
MTVDSCj13_RS05890 (MTVDSCj13_1145)	waaF	1116848..1117807 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
MTVDSCj13_RS05895 (MTVDSCj13_1146)	gmhA	1117788..1118348 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
MTVDSCj13_RS05900 (MTVDSCj13_1147)	rfaE1	1118345..1119730 (-)	1386	WP_032586263.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
MTVDSCj13_RS05905 (MTVDSCj13_1148)	rfaD	1119723..1120676 (-)	954	WP_069360414.1	ADP-glyceromanno-heptose 6-epimerase	-
MTVDSCj13_RS05910 (MTVDSCj13_1149)	gmhB	1120677..1121238 (-)	562	Protein_1136	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
MTVDSCj13_RS05915 (MTVDSCj13_1150)	-	1121319..1121621 (+)	303	WP_002852762.1	cytochrome c	-
MTVDSCj13_RS05920 (MTVDSCj13_1151)	ccoS	1121644..1121850 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=194680 MTVDSCj13_RS05890 WP_032586265.1 1116848..1117807(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=194680 MTVDSCj13_RS05890 WP_032586265.1 1116848..1117807(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94