Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   CCX85_RS07110 Genome accession   NZ_CP021640
Coordinates   1404570..1405604 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain JS12     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399570..1410604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCX85_RS07075 (CCX85_07080) - 1400346..1400648 (-) 303 WP_011285079.1 YlxQ-related RNA-binding protein -
  CCX85_RS07080 (CCX85_07085) rnpM 1400641..1400937 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  CCX85_RS07085 (CCX85_07090) nusA 1400953..1402110 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  CCX85_RS07090 (CCX85_07095) rimP 1402285..1402821 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  CCX85_RS07100 (CCX85_07105) trmB 1403080..1403715 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CCX85_RS07105 (CCX85_07110) ccrZ 1403715..1404506 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  CCX85_RS07110 (CCX85_07115) pptB 1404570..1405604 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  CCX85_RS07115 (CCX85_07120) pptA 1405607..1406332 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  CCX85_RS07120 (CCX85_07125) - 1406404..1406823 (+) 420 WP_002983376.1 HIT family protein -
  CCX85_RS07125 (CCX85_07130) - 1406820..1407176 (+) 357 WP_101248437.1 chemotaxis protein -
  CCX85_RS07130 (CCX85_07135) brpA 1407287..1408570 (-) 1284 WP_014411892.1 biofilm formation/cell division transcriptional regulator BrpA -
  CCX85_RS07135 (CCX85_07140) - 1408579..1409103 (-) 525 WP_101248438.1 GNAT family N-acetyltransferase -
  CCX85_RS07140 (CCX85_07145) tsaE 1409078..1409539 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=194468 CCX85_RS07110 WP_010922583.1 1404570..1405604(-) (pptB) [Streptococcus pyogenes strain JS12]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=194468 CCX85_RS07110 WP_010922583.1 1404570..1405604(-) (pptB) [Streptococcus pyogenes strain JS12]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAGCAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427