Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   A6L46_RS05630 Genome accession   NZ_CP016660
Coordinates   1075085..1076110 (+) Length   341 a.a.
NCBI ID   WP_002258504.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22804     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 1070085..1081110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L46_RS05600 (A6L46_05600) - 1070318..1071007 (-) 690 WP_002258510.1 uracil-DNA glycosylase family protein -
  A6L46_RS05605 (A6L46_05605) rsmA 1071204..1071983 (+) 780 WP_002258509.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  A6L46_RS05610 (A6L46_05610) - 1072156..1072884 (+) 729 WP_002258508.1 amino acid ABC transporter ATP-binding protein -
  A6L46_RS05615 (A6L46_05615) - 1072957..1073316 (+) 360 WP_002258507.1 hypothetical protein -
  A6L46_RS05620 (A6L46_05620) - 1073321..1073767 (+) 447 WP_002258506.1 protein YgfX -
  A6L46_RS05625 (A6L46_05625) folC 1073798..1075072 (+) 1275 WP_002258505.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  A6L46_RS05630 (A6L46_05630) tpc 1075085..1076110 (+) 1026 WP_002258504.1 cell division protein FtsN Machinery gene
  A6L46_RS05635 (A6L46_05635) - 1076103..1076600 (+) 498 WP_002258503.1 CvpA family protein -
  A6L46_RS05640 (A6L46_05640) purF 1076809..1078353 (+) 1545 WP_002258502.1 amidophosphoribosyltransferase -
  A6L46_RS05645 (A6L46_05645) greB 1078453..1078944 (+) 492 WP_002258501.1 transcription elongation factor GreB -
  A6L46_RS05650 (A6L46_05650) - 1079003..1079629 (+) 627 WP_002234733.1 phosphoribosylanthranilate isomerase -

Sequence


Protein


Download         Length: 341 a.a.        Molecular weight: 36473.91 Da        Isoelectric Point: 10.1579

>NTDB_id=190693 A6L46_RS05630 WP_002258504.1 1075085..1076110(+) (tpc) [Neisseria meningitidis strain M22804]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLESSAKPKQEEAAEKPQQAETAKTAPKQAKQRAAEKVPATADS
TDTVAVEKPKRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDR
SDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNAR
DAERDLNKLRVHGIAGQVTNE

Nucleotide


Download         Length: 1026 bp        

>NTDB_id=190693 A6L46_RS05630 WP_002258504.1 1075085..1076110(+) (tpc) [Neisseria meningitidis strain M22804]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAATATCAAAGGCTTGGAGTCATCCGCAAAACCGAAACAGGAAGAAGCTGCCGAAAAACCGC
AGCAGGCAGAAACTGCCAAAACCGCACCGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGT
ACGGATACGGTAGCGGTTGAAAAACCGAAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAA
GCCCAAAGCCAAAGAAACCAAAACCGCCGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATA
CGGCAAAATCCGACAGCGCGGTAAAAGAAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGT
TCGGACGGCAAAAAACACGAAACGGCACAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGG
TAAAAAAGCCGCCATTCAGGCAGGTTATGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTA
TCGATTCGACCATCACCGAAATTATGACCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGG
GATGCCGAACGCGATTTGAACAAATTGCGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains


Predicted by InterproScan.

(268-339)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

87.324

100

0.909


Multiple sequence alignment