Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   B6R96_RS16185 Genome accession   NZ_CP020555
Coordinates   3667343..3668467 (+) Length   374 a.a.
NCBI ID   WP_030727101.1    Uniprot ID   A0ABS4LC76
Organism   Streptomyces sp. Sge12     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3662343..3673467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6R96_RS16170 (B6R96_16170) - 3662839..3663711 (+) 873 WP_081522782.1 hypothetical protein -
  B6R96_RS16175 (B6R96_16175) - 3663790..3665553 (-) 1764 WP_107475525.1 sigma-70 family RNA polymerase sigma factor -
  B6R96_RS16180 (B6R96_16180) radA/sms 3665746..3667158 (+) 1413 WP_030389740.1 DNA repair protein RadA Machinery gene
  B6R96_RS16185 (B6R96_16185) disA 3667343..3668467 (+) 1125 WP_030727101.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  B6R96_RS16190 (B6R96_16190) - 3668501..3669238 (-) 738 WP_324603934.1 hypothetical protein -
  B6R96_RS16195 (B6R96_16195) - 3669462..3670079 (+) 618 WP_081522783.1 phosphatase PAP2 family protein -
  B6R96_RS16200 (B6R96_16200) - 3670103..3671065 (+) 963 WP_081522784.1 A/G-specific adenine glycosylase -
  B6R96_RS16205 (B6R96_16205) - 3671277..3671837 (+) 561 WP_030389735.1 SigE family RNA polymerase sigma factor -
  B6R96_RS16210 (B6R96_16210) - 3671873..3672514 (+) 642 WP_081522785.1 hypothetical protein -
  B6R96_RS16215 (B6R96_16215) cseB 3672544..3673257 (+) 714 WP_053704139.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40350.30 Da        Isoelectric Point: 4.9472

>NTDB_id=187599 B6R96_RS16185 WP_030727101.1 3667343..3668467(+) (disA) [Streptomyces sp. Sge12]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=187599 B6R96_RS16185 WP_030727101.1 3667343..3668467(+) (disA) [Streptomyces sp. Sge12]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGTGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCACTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTCCAGCTGGTGCC
CGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGAATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACCCATCCGGAGCTGCTGGAACTGGCGATCGTGGCGCGGGCGCTCGGGTACACCG
GTTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGGCGGTGGA
CGGGGTGGGCGAGGCCCGTGCCCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCCGAGTCGTCCATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444