Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLJM1_RS00725 Genome accession   NZ_CP015899
Coordinates   138443..139729 (+) Length   428 a.a.
NCBI ID   WP_011677189.1    Uniprot ID   A0A165FD42
Organism   Lactococcus cremoris strain JM1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 133443..144729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLJM1_RS00700 (LLJM1_0124) - 134513..135448 (-) 936 WP_031559015.1 IS30 family transposase -
  LLJM1_RS00705 (LLJM1_0125) - 135544..136044 (+) 501 WP_237024140.1 DNA alkylation repair protein -
  LLJM1_RS00710 (LLJM1_0126) yajC 136205..136537 (+) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLJM1_RS00715 (LLJM1_0127) - 136887..137621 (+) 735 WP_032951303.1 isoprenyl transferase -
  LLJM1_RS00720 (LLJM1_0128) - 137621..138424 (+) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLJM1_RS00725 (LLJM1_0129) eeP 138443..139729 (+) 1287 WP_011677189.1 RIP metalloprotease RseP Regulator
  LLJM1_RS00730 (LLJM1_0130) - 139799..141649 (+) 1851 WP_011836051.1 proline--tRNA ligase -
  LLJM1_RS00735 (LLJM1_0131) - 141665..142996 (+) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLJM1_RS00740 (LLJM1_02505) - 143266..143457 (+) 192 WP_021211222.1 hypothetical protein -
  LLJM1_RS00745 (LLJM1_02510) - 143631..144224 (+) 594 Protein_137 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46441.01 Da        Isoelectric Point: 6.5140

>NTDB_id=182909 LLJM1_RS00725 WP_011677189.1 138443..139729(+) (eeP) [Lactococcus cremoris strain JM1]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=182909 LLJM1_RS00725 WP_011677189.1 138443..139729(+) (eeP) [Lactococcus cremoris strain JM1]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGACGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A165FD42

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563

  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561


Multiple sequence alignment