Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   B1H24_RS07215 Genome accession   NZ_CP019978
Coordinates   1396366..1396806 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain Sag37     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1391366..1401806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1H24_RS07200 (B1H24_07200) - 1392024..1392650 (-) 627 WP_000449636.1 GTP pyrophosphokinase family protein -
  B1H24_RS07205 (B1H24_07205) rcrQ 1392758..1394512 (-) 1755 WP_000851084.1 ABC transporter ATP-binding protein Regulator
  B1H24_RS07210 (B1H24_07210) rcrP 1394502..1396319 (-) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  B1H24_RS07215 (B1H24_07215) rcrR 1396366..1396806 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  B1H24_RS07220 (B1H24_07220) - 1397075..1399147 (+) 2073 WP_000726930.1 surface-anchored 5'-nucleotidase -
  B1H24_RS07225 (B1H24_07225) - 1399184..1399594 (-) 411 WP_000594935.1 peptide deformylase -
  B1H24_RS07230 (B1H24_07230) gdhA 1399664..1401013 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  B1H24_RS07235 (B1H24_07235) - 1401181..1401690 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=182800 B1H24_RS07215 WP_000431168.1 1396366..1396806(-) (rcrR) [Streptococcus agalactiae strain Sag37]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=182800 B1H24_RS07215 WP_000431168.1 1396366..1396806(-) (rcrR) [Streptococcus agalactiae strain Sag37]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411