Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSA171_RS15875 Genome accession   NZ_CP015611
Coordinates   3020584..3021375 (-) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain U17-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3015584..3026375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA171_RS15850 (BSA171_15570) - 3018222..3019205 (-) 984 WP_041087338.1 glycosyltransferase family 2 protein -
  BSA171_RS15855 (BSA171_15575) - 3019505..3019777 (-) 273 WP_024425219.1 YfhJ family protein -
  BSA171_RS15860 (BSA171_15580) - 3019894..3020043 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  BSA171_RS15865 - 3020069..3020242 (+) 174 WP_008360604.1 YpzG family protein -
  BSA171_RS15870 (BSA171_15585) - 3020266..3020580 (-) 315 WP_041087336.1 YfhH family protein -
  BSA171_RS15875 (BSA171_15590) recX 3020584..3021375 (-) 792 WP_024425808.1 recombination regulator RecX Regulator
  BSA171_RS15880 (BSA171_15595) - 3021470..3022366 (+) 897 WP_041087332.1 TIGR01777 family oxidoreductase -
  BSA171_RS15885 - 3022419..3022529 (+) 111 WP_017358836.1 YfhE family protein -
  BSA171_RS15890 (BSA171_15600) - 3022591..3022746 (+) 156 WP_075611052.1 YfhD family protein -
  BSA171_RS15895 (BSA171_15605) - 3022785..3023372 (-) 588 WP_058837447.1 nitroreductase -
  BSA171_RS15900 (BSA171_15610) - 3023648..3024904 (+) 1257 WP_039177258.1 transcriptional regulator -
  BSA171_RS15905 (BSA171_15615) - 3024942..3025409 (-) 468 WP_048240073.1 thiol-disulfide oxidoreductase DCC family protein -
  BSA171_RS15910 (BSA171_15620) - 3025743..3026291 (-) 549 WP_024425227.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=181472 BSA171_RS15875 WP_024425808.1 3020584..3021375(-) (recX) [Bacillus safensis strain U17-1]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=181472 BSA171_RS15875 WP_024425808.1 3020584..3021375(-) (recX) [Bacillus safensis strain U17-1]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGCAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGTATGAGATCAGTGAAAGAAGTC
ACTGATTATTTAACGAAAAAAGAAATCCCGGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGCAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCTCTATCGCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTTAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCTCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639

Multiple sequence alignment