Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   BSA145_RS17945 Genome accession   NZ_CP015607
Coordinates   3435146..3435526 (-) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus safensis strain U14-5     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3430146..3440526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS17910 (BSA145_17540) - 3430732..3430962 (-) 231 WP_024425132.1 DUF896 domain-containing protein -
  BSA145_RS17915 (BSA145_17545) - 3431032..3431679 (-) 648 WP_024427081.1 YneB family resolvase-like protein -
  BSA145_RS17920 (BSA145_17550) yneA 3431697..3432008 (-) 312 WP_024425130.1 cell division suppressor protein YneA -
  BSA145_RS17925 (BSA145_17555) lexA 3432167..3432787 (+) 621 WP_034283422.1 transcriptional repressor LexA -
  BSA145_RS17930 (BSA145_17560) - 3432833..3433282 (-) 450 WP_041109226.1 hypothetical protein -
  BSA145_RS17935 (BSA145_17565) - 3433577..3434119 (+) 543 WP_075623242.1 IseA DL-endopeptidase inhibitor family protein -
  BSA145_RS17940 (BSA145_17570) - 3434152..3435000 (-) 849 WP_025093249.1 STAS domain-containing protein -
  BSA145_RS17945 (BSA145_17575) nucA/comI 3435146..3435526 (-) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BSA145_RS17950 (BSA145_17580) - 3435784..3436692 (-) 909 WP_075623243.1 trypsin-like serine peptidase -
  BSA145_RS17955 (BSA145_17585) - 3436969..3438321 (-) 1353 WP_075621865.1 IS1182 family transposase -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=181349 BSA145_RS17945 WP_044335941.1 3435146..3435526(-) (nucA/comI) [Bacillus safensis strain U14-5]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=181349 BSA145_RS17945 WP_044335941.1 3435146..3435526(-) (nucA/comI) [Bacillus safensis strain U14-5]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment