Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   BZJ79_RS11075 Genome accession   NZ_CP019592
Coordinates   2166013..2166483 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain GD5     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2161013..2171483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZJ79_RS11055 (BZJ79_11075) coaW 2161324..2162127 (+) 804 WP_000862732.1 type II pantothenate kinase -
  BZJ79_RS11060 (BZJ79_11080) - 2162257..2162928 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  BZJ79_RS11065 (BZJ79_11085) ldmS 2163327..2164520 (-) 1194 WP_000183714.1 L-aspartate--L-methionine ligase LdmS -
  BZJ79_RS11070 (BZJ79_11090) - 2164520..2165704 (-) 1185 WP_001291508.1 M20 family metallopeptidase -
  BZJ79_RS11075 (BZJ79_11095) luxS 2166013..2166483 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  BZJ79_RS11080 (BZJ79_11100) - 2166635..2166985 (-) 351 WP_001024035.1 membrane protein -
  BZJ79_RS11085 (BZJ79_11105) - 2166999..2168300 (-) 1302 WP_001242303.1 pyrimidine-nucleoside phosphorylase -
  BZJ79_RS11095 (BZJ79_11115) deoC 2168580..2169242 (-) 663 WP_001083328.1 deoxyribose-phosphate aldolase -
  BZJ79_RS11100 (BZJ79_11120) deoD 2169556..2170266 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  BZJ79_RS11105 (BZJ79_11125) - 2170387..2170830 (-) 444 WP_000070865.1 Dps family protein -
  BZJ79_RS11110 (BZJ79_11130) - 2171030..2171443 (-) 414 WP_001123309.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=181349 BZJ79_RS11075 WP_000164421.1 2166013..2166483(+) (luxS) [Staphylococcus aureus strain GD5]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=181349 BZJ79_RS11075 WP_000164421.1 2166013..2166483(+) (luxS) [Staphylococcus aureus strain GD5]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCAGCTTGTAATGAAGTACAATGTGGCTGGGCAGCTAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment