Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   BWR56_RS04770 Genome accession   NZ_CP019562
Coordinates   986161..986625 (-) Length   154 a.a.
NCBI ID   WP_001135756.1    Uniprot ID   A0ABU5G1H7
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 981161..991625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS04750 (BWR56_0940) - 981343..982335 (-) 993 WP_049505818.1 alpha-ketoacid dehydrogenase subunit beta -
  BWR56_RS04755 (BWR56_0941) - 982351..983319 (-) 969 WP_049505819.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  BWR56_RS04760 (BWR56_0942) - 983498..984838 (-) 1341 WP_076984552.1 MATE family efflux transporter -
  BWR56_RS04765 (BWR56_0943) - 984880..986148 (-) 1269 WP_076984553.1 dihydroorotase -
  BWR56_RS04770 (BWR56_0944) mutX 986161..986625 (-) 465 WP_001135756.1 NUDIX hydrolase Machinery gene
  BWR56_RS04775 (BWR56_0945) - 986635..987288 (-) 654 WP_076984554.1 uracil-DNA glycosylase -
  BWR56_RS04780 (BWR56_0946) - 987300..988055 (-) 756 WP_044020767.1 DUF4336 domain-containing protein -
  BWR56_RS04785 (BWR56_0947) - 988178..988471 (-) 294 WP_049505823.1 hypothetical protein -
  BWR56_RS04790 (BWR56_0948) - 988495..989187 (-) 693 WP_049505824.1 YjjG family noncanonical pyrimidine nucleotidase -
  BWR56_RS04795 - 989434..989754 (-) 321 WP_231110150.1 immunity protein Imm33 domain-containing protein -
  BWR56_RS04800 (BWR56_0949) imm40 989794..990111 (-) 318 WP_049505825.1 Imm40 family immunity protein -
  BWR56_RS04805 - 990389..990739 (-) 351 WP_231110151.1 hypothetical protein -
  BWR56_RS09935 (BWR56_0951) - 990763..991266 (-) 504 WP_049505827.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17754.12 Da        Isoelectric Point: 4.2639

>NTDB_id=180948 BWR56_RS04770 WP_001135756.1 986161..986625(-) (mutX) [Streptococcus oralis strain S.MIT/ORALIS-351]
MPQLATICYIDNGKELLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=180948 BWR56_RS04770 WP_001135756.1 986161..986625(-) (mutX) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTACTCATGCTCCATCGCAATAAGAAGCCCAATGA
TGTCCATGCTGGTAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGGGGAGAGACGCCTCAGGAATGCGCGGCACGTGAAA
TCCTCGAAGAAACAGGTCTCAAAGCCAAGCCTGTGTTAAAAGGCGTTATCACTTTTCCTGAGTTCACGCCTGATTTAGAC
TGGTACACCTATGTTTTTAAGGTAACGGAGTTTGAGGGGGACTTGATTGACTGCAACGAGGGAACATTAGAATGGGTTCC
CTATGATGAAGTCTTGAGCAAGCCGACTTGGGAAGGTGATCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTACGATGGGGATAAATTATTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981