Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | A0O21_RS03830 | Genome accession | NZ_CP014699 |
| Coordinates | 820949..822178 (+) | Length | 409 a.a. |
| NCBI ID | WP_067061562.1 | Uniprot ID | A0A172Q6Z2 |
| Organism | Streptococcus pantholopis strain TA 26 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 815949..827178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0O21_RS03805 (A0O21_03810) | - | 816506..817693 (-) | 1188 | WP_067061545.1 | hydroxymethylglutaryl-CoA synthase | - |
| A0O21_RS03810 (A0O21_03815) | - | 818293..818730 (+) | 438 | WP_227806885.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| A0O21_RS03815 (A0O21_03820) | - | 818727..819107 (+) | 381 | WP_067061551.1 | hypothetical protein | - |
| A0O21_RS03820 (A0O21_03825) | - | 819289..820128 (+) | 840 | WP_067061556.1 | thymidylate synthase | - |
| A0O21_RS03825 (A0O21_03830) | - | 820215..820712 (+) | 498 | WP_067061557.1 | dihydrofolate reductase | - |
| A0O21_RS03830 (A0O21_03835) | clpX | 820949..822178 (+) | 1230 | WP_067061562.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| A0O21_RS03835 (A0O21_03840) | yihA | 822194..822793 (+) | 600 | WP_067061565.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A0O21_RS03840 (A0O21_03845) | - | 823018..824394 (+) | 1377 | WP_067061570.1 | amino acid permease | - |
| A0O21_RS03845 (A0O21_03850) | mmuM | 824432..825382 (+) | 951 | WP_067061574.1 | homocysteine S-methyltransferase | - |
| A0O21_RS03850 (A0O21_03855) | - | 825441..826085 (-) | 645 | WP_067061577.1 | endonuclease III domain-containing protein | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 44915.31 Da Isoelectric Point: 4.4314
>NTDB_id=173348 A0O21_RS03830 WP_067061562.1 820949..822178(+) (clpX) [Streptococcus pantholopis strain TA 26]
MAGNRNNDVKVYCSFCGKSQDEVKKIIAGNSVFICNECVALSQEIIREELAEEVLADLAEVPKPKELLAVLNEYVVGQEH
AKRALAVAVYNHYKRISFTESQEESDVDLQKSNILMVGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAQRGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNKLLADSASYMQEIISEDIQKFGLIPEFIGRLPVVAALEELTADDLVRI
LTEPRNALVKQYQTLMSYDGVELDFDESALKAIAEKAIERRTGARGLRSIIEETMLDIMFEIPSQEEVSKVRITKEAVEG
TDGPVLETA
MAGNRNNDVKVYCSFCGKSQDEVKKIIAGNSVFICNECVALSQEIIREELAEEVLADLAEVPKPKELLAVLNEYVVGQEH
AKRALAVAVYNHYKRISFTESQEESDVDLQKSNILMVGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAQRGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNKLLADSASYMQEIISEDIQKFGLIPEFIGRLPVVAALEELTADDLVRI
LTEPRNALVKQYQTLMSYDGVELDFDESALKAIAEKAIERRTGARGLRSIIEETMLDIMFEIPSQEEVSKVRITKEAVEG
TDGPVLETA
Nucleotide
Download Length: 1230 bp
>NTDB_id=173348 A0O21_RS03830 WP_067061562.1 820949..822178(+) (clpX) [Streptococcus pantholopis strain TA 26]
ATGGCTGGAAATAGAAATAATGATGTTAAAGTTTACTGTTCTTTCTGCGGGAAAAGTCAAGATGAAGTGAAAAAAATTAT
TGCTGGCAACAGTGTATTTATTTGCAATGAATGTGTTGCCTTATCGCAGGAAATCATCAGAGAAGAGTTGGCCGAGGAGG
TCTTGGCCGACTTAGCAGAAGTGCCTAAGCCAAAGGAACTTCTGGCTGTTTTAAATGAGTATGTGGTCGGACAGGAACAT
GCTAAGCGCGCCTTAGCAGTAGCTGTCTACAATCATTACAAGCGCATTTCTTTTACAGAAAGCCAAGAAGAAAGCGATGT
CGATTTACAGAAGTCAAATATTCTCATGGTAGGTCCGACAGGGTCGGGAAAGACCTTTTTAGCACAGACTTTGGCTAAGA
CCCTCAATGTTCCCTTTGCAATTGCAGATGCGACATCGCTGACAGAAGCCGGCTATGTCGGAGAAGACGTTGAAAATATC
CTTTTAAAACTGATTCAGGCTGCTGATTTCAATATTGAACGGGCCCAACGCGGGATTATCTATGTCGATGAGATTGATAA
GATTGCTAAAAAGGGTGAGAATGTCTCCATTACACGGGACGTATCCGGTGAAGGTGTTCAGCAGGCTTTGCTTAAAATTA
TTGAGGGGACCGTTGCCAGCGTTCCGCCGCAAGGAGGGCGCAAACATCCTAACCAAGAGATGATTCAGATTGATACCAAG
AATATTCTTTTTATTGTCGGCGGAGCTTTTGATGGTATCGAAGATATTGTCAAACAGCGTCTGGGAGAGAAGATAATCGG
CTTCGGACAGAATAATAAGCTGCTGGCTGATAGTGCTTCTTATATGCAGGAAATCATTTCCGAAGATATTCAGAAATTCG
GGCTGATTCCTGAATTTATCGGCCGTCTTCCGGTAGTTGCAGCTTTGGAAGAACTGACAGCAGATGATTTGGTACGTATC
CTGACTGAACCGCGCAATGCTCTTGTTAAACAGTACCAGACATTGATGTCTTATGACGGCGTTGAACTGGATTTCGATGA
ATCGGCTCTCAAAGCTATTGCCGAAAAAGCTATTGAACGCCGGACAGGTGCACGTGGACTTCGCTCTATTATCGAAGAAA
CCATGCTTGATATCATGTTTGAAATCCCAAGTCAGGAAGAGGTTAGCAAGGTACGTATTACAAAAGAAGCTGTTGAAGGA
ACAGATGGTCCTGTTTTAGAAACAGCTTAA
ATGGCTGGAAATAGAAATAATGATGTTAAAGTTTACTGTTCTTTCTGCGGGAAAAGTCAAGATGAAGTGAAAAAAATTAT
TGCTGGCAACAGTGTATTTATTTGCAATGAATGTGTTGCCTTATCGCAGGAAATCATCAGAGAAGAGTTGGCCGAGGAGG
TCTTGGCCGACTTAGCAGAAGTGCCTAAGCCAAAGGAACTTCTGGCTGTTTTAAATGAGTATGTGGTCGGACAGGAACAT
GCTAAGCGCGCCTTAGCAGTAGCTGTCTACAATCATTACAAGCGCATTTCTTTTACAGAAAGCCAAGAAGAAAGCGATGT
CGATTTACAGAAGTCAAATATTCTCATGGTAGGTCCGACAGGGTCGGGAAAGACCTTTTTAGCACAGACTTTGGCTAAGA
CCCTCAATGTTCCCTTTGCAATTGCAGATGCGACATCGCTGACAGAAGCCGGCTATGTCGGAGAAGACGTTGAAAATATC
CTTTTAAAACTGATTCAGGCTGCTGATTTCAATATTGAACGGGCCCAACGCGGGATTATCTATGTCGATGAGATTGATAA
GATTGCTAAAAAGGGTGAGAATGTCTCCATTACACGGGACGTATCCGGTGAAGGTGTTCAGCAGGCTTTGCTTAAAATTA
TTGAGGGGACCGTTGCCAGCGTTCCGCCGCAAGGAGGGCGCAAACATCCTAACCAAGAGATGATTCAGATTGATACCAAG
AATATTCTTTTTATTGTCGGCGGAGCTTTTGATGGTATCGAAGATATTGTCAAACAGCGTCTGGGAGAGAAGATAATCGG
CTTCGGACAGAATAATAAGCTGCTGGCTGATAGTGCTTCTTATATGCAGGAAATCATTTCCGAAGATATTCAGAAATTCG
GGCTGATTCCTGAATTTATCGGCCGTCTTCCGGTAGTTGCAGCTTTGGAAGAACTGACAGCAGATGATTTGGTACGTATC
CTGACTGAACCGCGCAATGCTCTTGTTAAACAGTACCAGACATTGATGTCTTATGACGGCGTTGAACTGGATTTCGATGA
ATCGGCTCTCAAAGCTATTGCCGAAAAAGCTATTGAACGCCGGACAGGTGCACGTGGACTTCGCTCTATTATCGAAGAAA
CCATGCTTGATATCATGTTTGAAATCCCAAGTCAGGAAGAGGTTAGCAAGGTACGTATTACAAAAGAAGCTGTTGAAGGA
ACAGATGGTCCTGTTTTAGAAACAGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
88.509 |
100 |
0.885 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.122 |
96.333 |
0.56 |