Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AYJ52_RS07060 Genome accession   NZ_CP014477
Coordinates   1504659..1506887 (-) Length   742 a.a.
NCBI ID   WP_017402576.1    Uniprot ID   A0A009H8D5
Organism   Acinetobacter pittii strain AP_882     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1499659..1511887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYJ52_RS07040 (AYJ52_07040) cbpA 1499859..1500815 (-) 957 WP_017402580.1 DnaJ C-terminal domain-containing protein -
  AYJ52_RS07045 (AYJ52_07045) - 1500950..1501561 (-) 612 WP_017402579.1 LysE family translocator -
  AYJ52_RS07050 (AYJ52_07050) hslO 1501699..1502574 (-) 876 WP_017402578.1 Hsp33 family molecular chaperone HslO -
  AYJ52_RS07055 (AYJ52_07055) kefB 1502738..1504582 (-) 1845 WP_017402577.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  AYJ52_RS07060 (AYJ52_07060) priA 1504659..1506887 (-) 2229 WP_017402576.1 primosomal protein N' Machinery gene
  AYJ52_RS07065 (AYJ52_07065) gspF 1507036..1508241 (+) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  AYJ52_RS07070 (AYJ52_07070) gspG 1508265..1508780 (+) 516 WP_017402575.1 type II secretion system major pseudopilin GspG -
  AYJ52_RS07075 (AYJ52_07075) - 1509048..1509392 (+) 345 WP_017398750.1 hypothetical protein -
  AYJ52_RS07080 (AYJ52_07080) csaA 1509536..1509874 (+) 339 WP_017402574.1 tRNA-binding protein -
  AYJ52_RS07085 (AYJ52_07085) lnt 1509876..1511435 (-) 1560 WP_017402573.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84035.88 Da        Isoelectric Point: 8.6587

>NTDB_id=171847 AYJ52_RS07060 WP_017402576.1 1504659..1506887(-) (priA) [Acinetobacter pittii strain AP_882]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVKLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSTERARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=171847 AYJ52_RS07060 WP_017402576.1 1504659..1506887(-) (priA) [Acinetobacter pittii strain AP_882]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGACCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTAAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCACGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCTCAGACGGGCAAAGCATCTATTATTTTAGGAACCCGCTCAGCCATCTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAACATGACCTCTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
GCGTGATGTCGCACTGTACCGCGGTCACTTGCAAAGCTGCCCTGTTATTTTAGGTTCAGCAACACCAAGTATTGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTGCGCTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATCAGCCAGCCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTTTGTGAAAGCTGTGGGTGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCTTAGGTGCTGGAACGGCTAAGGTTGAAGA
GCACTTACAAGAATTATTTCCAGACTATGATGTGATTCGGGTTGATCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTGGGCACTCAAATGTTGGCTAAAGGCCATCATTTCCCA
CACGTAACTTTGGTTGCTATTTTAGATATTGATGCTGGGTTACTTAGTGTCGATATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCGCCTTACCGTTATGCAGTACTGATACGTGCAGAGTCCAAAGATCGCGACTACACCTTACATTTCTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGACATTGTTGATATTTGGGGACCGATTCCAGCCCCTATGGAGCGTAAAGCAG
GACGCTACCGCGCCCACATGGTAATTTTATCTACTGAACGTGCTCGTCTACATTTTTACTTAAGGCAATGGTGGTCACAA
TTGGTTCATGCACCACGGCAGCATCAACTTCGGCTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009H8D5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.844

100

0.978

Multiple sequence alignment