Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AYJ52_RS03250 | Genome accession | NZ_CP014477 |
| Coordinates | 693387..693914 (-) | Length | 175 a.a. |
| NCBI ID | WP_002116864.1 | Uniprot ID | A0AAN4MGG3 |
| Organism | Acinetobacter pittii strain AP_882 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 688387..698914
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ52_RS03230 (AYJ52_03230) | - | 688581..689450 (-) | 870 | WP_017387052.1 | hypothetical protein | - |
| AYJ52_RS03235 (AYJ52_03235) | aroB | 689467..690549 (-) | 1083 | WP_017403271.1 | 3-dehydroquinate synthase | - |
| AYJ52_RS03240 (AYJ52_03240) | aroK | 690578..691147 (-) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
| AYJ52_RS03245 (AYJ52_03245) | pilQ | 691159..693324 (-) | 2166 | WP_017387053.1 | type IV pilus secretin PilQ | Machinery gene |
| AYJ52_RS03250 (AYJ52_03250) | pilP | 693387..693914 (-) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| AYJ52_RS03255 (AYJ52_03255) | pilO | 693925..694677 (-) | 753 | WP_017387054.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AYJ52_RS03260 (AYJ52_03260) | pilN | 694674..695315 (-) | 642 | WP_017387055.1 | PilN domain-containing protein | Machinery gene |
| AYJ52_RS03265 (AYJ52_03265) | pilM | 695315..696373 (-) | 1059 | WP_005067078.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19265.32 Da Isoelectric Point: 9.0270
>NTDB_id=171831 AYJ52_RS03250 WP_002116864.1 693387..693914(-) (pilP) [Acinetobacter pittii strain AP_882]
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=171831 AYJ52_RS03250 WP_002116864.1 693387..693914(-) (pilP) [Acinetobacter pittii strain AP_882]
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATCTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATCTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
88.571 |
100 |
0.886 |
| comL | Acinetobacter baylyi ADP1 |
75.152 |
94.286 |
0.709 |