Detailed information NTG0169264

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: A4W84_RS03585
• Genome accession: NZ_CP017568
• Coordinates: 695575..697992 (+)
• Length: 805 a.a.
• NCBI ID: WP_056948332.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.417
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 690575..702992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W84_RS03555 (A4W84_03485)	recN	690888..692591 (+)	1704	WP_056948329.1	DNA repair protein RecN	Machinery gene
A4W84_RS03560 (A4W84_03490)	-	692650..692973 (-)	324	WP_056948330.1	hypothetical protein	-
A4W84_RS03565 (A4W84_03495)	-	693097..693321 (+)	225	WP_011374393.1	YdbC family protein	-
A4W84_RS03570 (A4W84_03500)	gmk	693394..694005 (+)	612	WP_011374394.1	guanylate kinase	-
A4W84_RS03575 (A4W84_03505)	rpoZ	694010..694267 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
A4W84_RS03580 (A4W84_03510)	coaBC	694356..695573 (+)	1218	WP_011374396.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
A4W84_RS03585 (A4W84_03515)	priA	695575..697992 (+)	2418	WP_056948332.1	primosomal protein N'	Machinery gene
A4W84_RS03590 (A4W84_03520)	fmt	698012..698968 (+)	957	WP_099947313.1	methionyl-tRNA formyltransferase	-
A4W84_RS03595 (A4W84_03525)	rsmB	698958..700301 (+)	1344	WP_056948336.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
A4W84_RS03600 (A4W84_03530)	-	700323..701069 (+)	747	WP_056948338.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
A4W84_RS03605 (A4W84_03535)	pknB	701066..702949 (+)	1884	WP_082268160.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90603.07 Da
• Isoelectric Point: 7.6833

>NTDB_id=169264 A4W84_RS03585 WP_056948332.1 695575..697992(+) (priA) [Latilactobacillus sakei strain TMW 1.417]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLTDEIPTDLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAVFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHNCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFSP
ALLAGIKERMQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPKICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=169264 A4W84_RS03585 WP_056948332.1 695575..697992(+) (priA) [Latilactobacillus sakei strain TMW 1.417]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGCGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCGGATTGGTTAGCACAACAGACGTATGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAACTGATGAAATTCCAACGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGATGAGTTGACTTTTGATCAGAATCTGGCGCCTGATAAGTTAAAACAACTCATGCAATTGCAACGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGACAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCGACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAGAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACTGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCCGTCTTGCAACAAGGGAAGACCGCA
CTGATGTTAGTTCCTGAAATTGCCTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTCGCTGT
GTTACATAGTGGCTTATCTGAAGGTGAGAAATACGACGAATGGCGGCGCATTGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCGTTTTTGCGCCACTTGAAGATATCGGCGTGATTATTATGGACGAAGAACATGAAGCCAGTTATAAG
CAAGACGAAAGTCCCCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATAACTGCCCGGTCATTTTAGG
CAGCGCCACACCATCGTTAGAATCCCGGGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAGGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGATGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAAGATTTGCCCCAGCTGTCAGAGTCGTCAAATTCGC
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATCTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAGGGCCTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACTGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCAGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCCAAGCAGCACGATTATGAAGGCTTTTATC
AATATGAAATGGCGGTGCGCCACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCTCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Helicase conserved C-terminal domain (Helicase_C) (561-663)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.792	100	0.52