Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | ASZ82_RS03020 | Genome accession | NZ_CP013303 |
| Coordinates | 596131..596649 (+) | Length | 172 a.a. |
| NCBI ID | WP_001130227.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain CRC711 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 591131..601649
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASZ82_RS03010 (ASZ82_00595) | - | 591541..594396 (+) | 2856 | WP_001233047.1 | M16 family metallopeptidase | - |
| ASZ82_RS03015 (ASZ82_00596) | gshA | 594508..596082 (+) | 1575 | WP_000032608.1 | glutamate--cysteine ligase | - |
| ASZ82_RS03020 (ASZ82_00597) | luxS | 596131..596649 (+) | 519 | WP_001130227.1 | S-ribosylhomocysteine lyase | Regulator |
| ASZ82_RS03025 (ASZ82_00598) | - | 596719..597999 (-) | 1281 | WP_000340990.1 | HlyC/CorC family transporter | - |
| ASZ82_RS03030 (ASZ82_00599) | - | 598082..598876 (-) | 795 | WP_000369278.1 | cytochrome C assembly family protein | - |
| ASZ82_RS03035 (ASZ82_00600) | ffh | 599089..600474 (+) | 1386 | WP_000462720.1 | signal recognition particle protein | - |
| ASZ82_RS03040 (ASZ82_00601) | rpsP | 600710..600958 (+) | 249 | WP_000256449.1 | 30S ribosomal protein S16 | - |
| ASZ82_RS03045 (ASZ82_00602) | rimM | 600986..601540 (+) | 555 | WP_000061906.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19080.90 Da Isoelectric Point: 5.2199
>NTDB_id=161670 ASZ82_RS03020 WP_001130227.1 596131..596649(+) (luxS) [Vibrio cholerae strain CRC711]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSERGIHTLEHLYAGFMRNHLNGSQVEIIDISP
MGCRTGFYMSLIGAPTEQQVAQAWLAAMQDVLKVESQEQIPELNEYQCGTAAMHSLEEAKAIAKNVIAAGISVNRNDELA
LPESMLNELKVH
Nucleotide
Download Length: 519 bp
>NTDB_id=161670 ASZ82_RS03020 WP_001130227.1 596131..596649(+) (luxS) [Vibrio cholerae strain CRC711]
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
ATGCCATTATTAGACAGTTTTACCGTCGATCATACTCGTATGAATGCACCGGCGGTGCGTGTTGCCAAAACCATGCAAAC
CCCAAAAGGGGATACGATTACCGTATTTGATTTGCGTTTTACTATGCCAAACAAAGATATCTTGTCTGAGCGCGGTATCC
ATACTCTAGAGCATCTCTACGCGGGCTTTATGCGCAATCACCTTAACGGCAGCCAAGTGGAGATCATCGATATTTCACCA
ATGGGTTGCCGTACAGGTTTCTACATGAGCTTGATTGGTGCGCCGACAGAACAGCAAGTGGCACAAGCATGGCTAGCCGC
AATGCAAGATGTGTTGAAAGTTGAAAGCCAAGAGCAAATTCCTGAGCTGAATGAGTACCAGTGCGGCACTGCGGCGATGC
ACTCGCTCGAAGAAGCCAAAGCGATTGCGAAAAACGTGATTGCGGCAGGCATCTCGGTTAACCGTAACGATGAGTTGGCG
CTGCCCGAATCTATGCTCAATGAGCTGAAGGTTCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
100 |
100 |
1 |