Detailed information NTG0159129

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: A9494_RS04260
• Genome accession: NZ_CP016175
• Coordinates: 843668..844738 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain LSM102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 838668..849738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9494_RS04235 (A9494_04150)	-	839777..840445 (+)	669	WP_011922395.1	SatD family protein	-
A9494_RS04240 (A9494_04155)	-	840449..841189 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
A9494_RS04245 (A9494_04160)	-	841254..841691 (+)	438	WP_087892715.1	AAA family ATPase	-
A9494_RS04255 (A9494_04165)	-	842408..843309 (+)	902	Protein_763	Abi family protein	-
A9494_RS04260 (A9494_04170)	xerS	843668..844738 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
A9494_RS04265 (A9494_04175)	-	844808..846316 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
A9494_RS04270 (A9494_04180)	-	846392..847333 (-)	942	WP_012775102.1	sensor histidine kinase	-
A9494_RS04275 (A9494_04185)	braR	847330..847995 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
A9494_RS04280 (A9494_04190)	-	848034..848291 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
A9494_RS04285 (A9494_04195)	relB	848275..848526 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=159129 A9494_RS04260 WP_012775101.1 843668..844738(+) (xerS) [Streptococcus suis strain LSM102]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=159129 A9494_RS04260 WP_012775101.1 843668..844738(+) (xerS) [Streptococcus suis strain LSM102]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831