Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAST40_RS10085 | Genome accession | NZ_CP012979 |
| Coordinates | 2037837..2038232 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain ST20130940 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2032837..2043232
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST40_RS10060 (SAST40_03506) | thiE | 2033243..2033884 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAST40_RS10065 (SAST40_02057) | thiM | 2033886..2034677 (-) | 792 | WP_001108480.1 | hydroxyethylthiazole kinase | - |
| SAST40_RS10070 (SAST40_02058) | thiD | 2034661..2035491 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAST40_RS10075 (SAST40_02059) | tenA | 2035484..2036173 (-) | 690 | WP_000396079.1 | thiaminase II | - |
| SAST40_RS10080 (SAST40_02061) | sceD | 2036753..2037448 (-) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| SAST40_RS10085 (SAST40_03999) | ssb | 2037837..2038232 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAST40_RS10090 (SAST40_02063) | - | 2038426..2038866 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAST40_RS10095 (SAST40_02064) | fabZ | 2038924..2039364 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAST40_RS10100 (SAST40_02065) | murA | 2039398..2040663 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAST40_RS10105 (SAST40_02067) | - | 2040774..2041007 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SAST40_RS10110 | - | 2041139..2041231 (-) | 93 | WP_031835036.1 | hypothetical protein | - |
| SAST40_RS10115 (SAST40_02068) | - | 2041567..2041971 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=158918 SAST40_RS10085 WP_000932694.1 2037837..2038232(-) (ssb) [Staphylococcus aureus strain ST20130940]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=158918 SAST40_RS10085 WP_000932694.1 2037837..2038232(-) (ssb) [Staphylococcus aureus strain ST20130940]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |