Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AMQ28_RS01690 | Genome accession | NZ_CP012608 |
| Coordinates | 348961..349350 (-) | Length | 129 a.a. |
| NCBI ID | WP_053580215.1 | Uniprot ID | A0A0M4GK14 |
| Organism | Acinetobacter sp. TTH0-4 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343961..354350
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMQ28_RS01660 (AMQ28_01660) | tadA | 344110..344631 (-) | 522 | WP_053578067.1 | tRNA adenosine(34) deaminase TadA | - |
| AMQ28_RS01665 (AMQ28_01665) | - | 344628..345758 (-) | 1131 | WP_053578068.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AMQ28_RS01670 (AMQ28_01670) | ung | 345755..346468 (-) | 714 | WP_053578069.1 | uracil-DNA glycosylase | - |
| AMQ28_RS01675 (AMQ28_01675) | - | 346514..347110 (-) | 597 | WP_053578070.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| AMQ28_RS01680 (AMQ28_01680) | gspK | 347269..348216 (-) | 948 | WP_053578071.1 | type II secretion system minor pseudopilin GspK | - |
| AMQ28_RS01685 (AMQ28_01685) | xcpW | 348254..348880 (-) | 627 | WP_053580214.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AMQ28_RS01690 (AMQ28_01690) | xcpV | 348961..349350 (-) | 390 | WP_053580215.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AMQ28_RS01695 (AMQ28_01695) | - | 349451..350011 (-) | 561 | WP_053578072.1 | type II secretion system protein | - |
| AMQ28_RS01700 (AMQ28_01700) | - | 350021..350635 (-) | 615 | WP_053578073.1 | TetR/AcrR family transcriptional regulator | - |
| AMQ28_RS01705 (AMQ28_01705) | - | 350681..351454 (-) | 774 | WP_053578074.1 | TatD family hydrolase | - |
| AMQ28_RS01710 (AMQ28_01710) | - | 351481..351822 (-) | 342 | WP_053578075.1 | PilZ domain-containing protein | - |
| AMQ28_RS01715 (AMQ28_01715) | - | 351842..352825 (-) | 984 | WP_053580216.1 | hypothetical protein | - |
| AMQ28_RS01720 (AMQ28_01720) | kdsB | 352876..353637 (-) | 762 | WP_053578076.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14303.50 Da Isoelectric Point: 9.6936
>NTDB_id=155738 AMQ28_RS01690 WP_053580215.1 348961..349350(-) (xcpV) [Acinetobacter sp. TTH0-4]
MLRSRRTLGFTLLEVMVALAIFATAAIALTKVAMQYTQATANAILRTKAQFVALNEVANMEINQEWLQGTQSEQSTQQGE
MWQIDKSAQSTISPNVQRIEVQVSLLNVDSGKVQAGITHLVFFNYKAKV
MLRSRRTLGFTLLEVMVALAIFATAAIALTKVAMQYTQATANAILRTKAQFVALNEVANMEINQEWLQGTQSEQSTQQGE
MWQIDKSAQSTISPNVQRIEVQVSLLNVDSGKVQAGITHLVFFNYKAKV
Nucleotide
Download Length: 390 bp
>NTDB_id=155738 AMQ28_RS01690 WP_053580215.1 348961..349350(-) (xcpV) [Acinetobacter sp. TTH0-4]
ATGCTTAGATCTCGTCGTACTTTAGGATTTACTCTACTTGAAGTCATGGTGGCGTTGGCTATTTTTGCCACTGCCGCAAT
TGCTCTGACAAAAGTGGCAATGCAATATACTCAAGCCACTGCAAATGCAATTTTACGGACGAAAGCACAATTTGTCGCTT
TAAATGAAGTGGCGAATATGGAAATCAATCAAGAATGGTTACAAGGAACACAATCAGAACAAAGCACACAGCAGGGAGAA
ATGTGGCAAATTGATAAATCTGCGCAATCCACCATTAGTCCAAATGTACAGCGTATAGAAGTACAAGTGAGCTTATTGAA
TGTAGACTCAGGAAAAGTGCAAGCAGGAATTACGCATCTAGTTTTTTTTAACTACAAGGCTAAAGTGTAA
ATGCTTAGATCTCGTCGTACTTTAGGATTTACTCTACTTGAAGTCATGGTGGCGTTGGCTATTTTTGCCACTGCCGCAAT
TGCTCTGACAAAAGTGGCAATGCAATATACTCAAGCCACTGCAAATGCAATTTTACGGACGAAAGCACAATTTGTCGCTT
TAAATGAAGTGGCGAATATGGAAATCAATCAAGAATGGTTACAAGGAACACAATCAGAACAAAGCACACAGCAGGGAGAA
ATGTGGCAAATTGATAAATCTGCGCAATCCACCATTAGTCCAAATGTACAGCGTATAGAAGTACAAGTGAGCTTATTGAA
TGTAGACTCAGGAAAAGTGCAAGCAGGAATTACGCATCTAGTTTTTTTTAACTACAAGGCTAAAGTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80.488 |
95.349 |
0.767 |