Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI23_RS07380 Genome accession   NZ_CP012221
Coordinates   1370268..1370915 (+) Length   215 a.a.
NCBI ID   WP_115766855.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ018CCUA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365268..1375915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI23_RS07355 (AEI23_07375) - 1366138..1367961 (+) 1824 WP_052796196.1 type IV secretory system conjugative DNA transfer family protein -
  AEI23_RS07360 (AEI23_07380) - 1367978..1368697 (+) 720 WP_052796195.1 conjugal transfer protein TraL -
  AEI23_RS07365 (AEI23_07385) - 1368789..1369031 (+) 243 WP_002907823.1 hypothetical protein -
  AEI23_RS07370 (AEI23_07390) - 1369024..1369707 (+) 684 WP_085782102.1 Fic family protein -
  AEI23_RS07375 (AEI23_07395) lepB 1369712..1370179 (+) 468 WP_002907837.1 signal peptidase I -
  AEI23_RS07380 (AEI23_07400) CJE0566 1370268..1370915 (+) 648 WP_115766855.1 DNA/RNA non-specific endonuclease Regulator
  AEI23_RS07385 (AEI23_07405) - 1370948..1371343 (+) 396 WP_002907857.1 conjugal transfer protein TraM -
  AEI23_RS07390 (AEI23_07410) - 1371424..1372110 (+) 687 WP_002907859.1 AAA family ATPase -
  AEI23_RS07395 (AEI23_07415) - 1372113..1372337 (+) 225 WP_052816869.1 hypothetical protein -
  AEI23_RS10125 - 1372434..1372562 (-) 129 WP_257408334.1 hypothetical protein -
  AEI23_RS07400 (AEI23_07420) - 1372717..1374141 (-) 1425 Protein_1453 motility associated factor glycosyltransferase family protein -
  AEI23_RS07405 (AEI23_07425) - 1374143..1374397 (-) 255 Protein_1454 DUF115 domain-containing protein -
  AEI23_RS07410 (AEI23_07430) - 1374407..1375649 (-) 1243 Protein_1455 DUF2920 family protein -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 25330.80 Da        Isoelectric Point: 9.7298

>NTDB_id=152515 AEI23_RS07380 WP_115766855.1 1370268..1370915(+) (CJE0566) [Campylobacter jejuni strain CJ018CCUA]
MKKLMILPFLATLALADYTQYKPSEDFAKYFTTQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQVKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLFNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRSYQIKCQ

Nucleotide


Download         Length: 648 bp        

>NTDB_id=152515 AEI23_RS07380 WP_115766855.1 1370268..1370915(+) (CJE0566) [Campylobacter jejuni strain CJ018CCUA]
ATGAAAAAACTTATGATTTTACCATTCCTAGCTACTCTAGCCTTAGCTGATTACACACAATACAAACCAAGCGAAGATTT
TGCTAAGTATTTTACGACGCAAAATTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGATAATTTAAAAGGCGAACAAGTCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGTGGTTATGACAGAGGACACACTCT
TTTTAATGCTTCCATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAACAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGATCTTATCAGATTAAGT
GTCAGTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(25-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

91.589

99.535

0.912
  CJE1441 Campylobacter jejuni RM1221

90.654

99.535

0.902

Multiple sequence alignment