Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AC241_RS10100 | Genome accession | NZ_CP012099 |
| Coordinates | 1931066..1931353 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain HS18-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1926066..1936353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC241_RS10080 (AC241_10080) | - | 1927237..1927434 (+) | 198 | WP_001048102.1 | DUF4083 domain-containing protein | - |
| AC241_RS10085 (AC241_10085) | - | 1927466..1927927 (+) | 462 | WP_000024996.1 | NUDIX hydrolase | - |
| AC241_RS10090 (AC241_10090) | nadE | 1927976..1928794 (-) | 819 | WP_000174904.1 | ammonia-dependent NAD(+) synthetase | - |
| AC241_RS10095 (AC241_10095) | - | 1929069..1930949 (+) | 1881 | WP_048565068.1 | FtsX-like permease family protein | - |
| AC241_RS10100 (AC241_10100) | abrB | 1931066..1931353 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| AC241_RS10105 (AC241_10105) | - | 1931629..1932576 (+) | 948 | WP_043935044.1 | serine protease | - |
| AC241_RS10110 (AC241_10110) | - | 1932616..1932924 (-) | 309 | WP_001259903.1 | ArsR/SmtB family transcription factor | - |
| AC241_RS10115 (AC241_10115) | - | 1933031..1933966 (+) | 936 | WP_050843320.1 | aldo/keto reductase | - |
| AC241_RS10120 (AC241_10120) | - | 1934014..1935189 (+) | 1176 | WP_050843322.1 | MFS transporter | - |
| AC241_RS10125 (AC241_10125) | - | 1935484..1935708 (-) | 225 | WP_000162602.1 | hypothetical protein | - |
| AC241_RS10130 (AC241_10130) | - | 1935793..1936140 (-) | 348 | WP_000426321.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=151386 AC241_RS10100 WP_000648324.1 1931066..1931353(+) (abrB) [Bacillus thuringiensis strain HS18-1]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=151386 AC241_RS10100 WP_000648324.1 1931066..1931353(+) (abrB) [Bacillus thuringiensis strain HS18-1]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCTAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCTAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |