Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   B14_RS09330 Genome accession   NZ_CP014842
Coordinates   1804216..1805016 (+) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   A0ABX3I0N1
Organism   Bacillus licheniformis strain SCDB 14     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799216..1810016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B14_RS09310 (B14_01862) - 1799238..1800083 (+) 846 WP_003183371.1 TlyA family RNA methyltransferase -
  B14_RS09315 (B14_01863) ahrC 1800249..1800698 (+) 450 WP_003183369.1 transcriptional regulator AhrC/ArgR -
  B14_RS09320 (B14_01864) recN 1800730..1802460 (+) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  B14_RS09325 (B14_01865) spoIVB 1802610..1803926 (+) 1317 WP_044051837.1 SpoIVB peptidase -
  B14_RS09330 (B14_01866) spo0A 1804216..1805016 (+) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  B14_RS09335 (B14_01867) - 1805389..1805685 (+) 297 WP_003183359.1 antimicrobial peptide LCI -
  B14_RS09340 (B14_01868) - 1805814..1806197 (+) 384 WP_003183357.1 serine O-acetyltransferase -
  B14_RS09345 (B14_01869) - 1806528..1807958 (+) 1431 WP_080623591.1 IS1182 family transposase -
  B14_RS09350 (B14_01870) - 1808232..1808552 (+) 321 WP_034291702.1 hypothetical protein -
  B14_RS09355 (B14_01871) - 1808588..1809208 (+) 621 WP_044822591.1 N-acetylmuramoyl-L-alanine amidase family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=150335 B14_RS09330 WP_003183361.1 1804216..1805016(+) (spo0A) [Bacillus licheniformis strain SCDB 14]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=150335 B14_RS09330 WP_003183361.1 1804216..1805016(+) (spo0A) [Bacillus licheniformis strain SCDB 14]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment