Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | A1R12_RS08060 | Genome accession | NZ_CP014783 |
| Coordinates | 1625450..1625812 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain B15 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1620450..1630812
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1R12_RS08030 (A1R12_08030) | flgD | 1621353..1621793 (+) | 441 | WP_015239855.1 | flagellar hook assembly protein FlgD | - |
| A1R12_RS08035 (A1R12_08035) | flgG | 1621818..1622594 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| A1R12_RS08040 (A1R12_08040) | - | 1622634..1622849 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| A1R12_RS08045 (A1R12_08045) | fliL | 1622846..1623265 (+) | 420 | WP_014417773.1 | flagellar basal body-associated protein FliL | - |
| A1R12_RS08050 (A1R12_08050) | fliM | 1623299..1624297 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| A1R12_RS08055 (A1R12_08055) | fliY | 1624287..1625423 (+) | 1137 | WP_039251507.1 | flagellar motor switch phosphatase FliY | - |
| A1R12_RS08060 (A1R12_08060) | pilH | 1625450..1625812 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| A1R12_RS08065 (A1R12_08065) | fliZ | 1625827..1626480 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| A1R12_RS08070 (A1R12_08070) | fliP | 1626473..1627138 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| A1R12_RS08075 (A1R12_08075) | fliQ | 1627153..1627422 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| A1R12_RS08080 (A1R12_08080) | fliR | 1627429..1628208 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| A1R12_RS08085 (A1R12_08085) | flhB | 1628208..1629287 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=149668 A1R12_RS08060 WP_003154238.1 1625450..1625812(+) (pilH) [Bacillus amyloliquefaciens strain B15]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=149668 A1R12_RS08060 WP_003154238.1 1625450..1625812(+) (pilH) [Bacillus amyloliquefaciens strain B15]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |