Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   A1R12_RS00575 Genome accession   NZ_CP014783
Coordinates   108072..109154 (+) Length   360 a.a.
NCBI ID   WP_007410390.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain B15     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103072..114154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1R12_RS00560 (A1R12_00560) - 103075..104166 (+) 1092 WP_015416670.1 protein arginine kinase -
  A1R12_RS00565 (A1R12_00565) clpC 104163..106595 (+) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  A1R12_RS00570 (A1R12_00570) radA/sms 106689..108068 (+) 1380 WP_015416671.1 DNA repair protein RadA Machinery gene
  A1R12_RS00575 (A1R12_00575) disA 108072..109154 (+) 1083 WP_007410390.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  A1R12_RS00580 (A1R12_00580) - 109268..110368 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  A1R12_RS00585 (A1R12_00585) ispD 110381..111079 (+) 699 WP_015239038.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  A1R12_RS00590 (A1R12_00590) ispF 111072..111548 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  A1R12_RS00595 (A1R12_00595) gltX 111640..113091 (+) 1452 WP_007410392.1 glutamate--tRNA ligase -
  A1R12_RS00600 (A1R12_00600) cysE 113402..114055 (+) 654 WP_007410393.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.26 Da        Isoelectric Point: 5.7630

>NTDB_id=149609 A1R12_RS00575 WP_007410390.1 108072..109154(+) (disA) [Bacillus amyloliquefaciens strain B15]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAKKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=149609 A1R12_RS00575 WP_007410390.1 108072..109154(+) (disA) [Bacillus amyloliquefaciens strain B15]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGATTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGACTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACCAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTCGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTT
AAAACGGCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.167

100

0.942


Multiple sequence alignment