Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABT55_RS03545 | Genome accession | NZ_CP011798 |
| Coordinates | 751227..751754 (+) | Length | 175 a.a. |
| NCBI ID | WP_020882840.1 | Uniprot ID | A0A839BRA2 |
| Organism | Enterobacter ludwigii strain UW5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 746227..756754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABT55_RS03525 (ABT55_03505) | aphA | 746550..747263 (+) | 714 | WP_014168217.1 | acid phosphatase AphA | - |
| ABT55_RS03530 (ABT55_03510) | - | 747377..747793 (+) | 417 | WP_047954921.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| ABT55_RS03535 (ABT55_03515) | - | 747796..748149 (+) | 354 | WP_014168219.1 | MmcQ/YjbR family DNA-binding protein | - |
| ABT55_RS03540 (ABT55_03520) | uvrA | 748153..750975 (-) | 2823 | WP_014168220.1 | excinuclease ABC subunit UvrA | - |
| ABT55_RS03545 (ABT55_03525) | ssb | 751227..751754 (+) | 528 | WP_020882840.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ABT55_RS03550 (ABT55_03530) | - | 751818..752099 (-) | 282 | WP_020882839.1 | YjcB family protein | - |
| ABT55_RS03555 (ABT55_03535) | - | 752589..753989 (+) | 1401 | WP_032681915.1 | sensor domain-containing diguanylate cyclase | - |
| ABT55_RS03560 (ABT55_03540) | - | 754329..755894 (+) | 1566 | WP_047954922.1 | EAL domain-containing protein | - |
| ABT55_RS03565 (ABT55_03545) | soxS | 755901..756227 (-) | 327 | WP_047954923.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18705.74 Da Isoelectric Point: 5.2456
>NTDB_id=148762 ABT55_RS03545 WP_020882840.1 751227..751754(+) (ssb) [Enterobacter ludwigii strain UW5]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=148762 ABT55_RS03545 WP_020882840.1 751227..751754(+) (ssb) [Enterobacter ludwigii strain UW5]
ATGGCCAGCAGAGGCGTAAATAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAATAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
56.522 |
100 |
0.594 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.474 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.474 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.366 |