Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB179_RS08015 | Genome accession | NZ_CP011685 |
| Coordinates | 1631316..1631615 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain ZJ5499 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1626316..1636615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB179_RS07990 (AB179_07980) | gcvPA | 1627528..1628874 (-) | 1347 | WP_063653170.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AB179_RS07995 (AB179_07985) | gcvT | 1628894..1629985 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB179_RS08000 (AB179_07990) | - | 1630144..1630668 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| AB179_RS08005 (AB179_07995) | - | 1630658..1630804 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| AB179_RS08010 (AB179_08000) | comGF | 1630901..1631398 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB179_RS08015 (AB179_08005) | comGE | 1631316..1631615 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| AB179_RS08020 (AB179_08010) | comGD | 1631602..1632048 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB179_RS08025 (AB179_08015) | comGC | 1632026..1632337 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB179_RS08030 (AB179_08020) | comGB | 1632351..1633421 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB179_RS08035 (AB179_08025) | comGA | 1633393..1634367 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB179_RS08040 (AB179_08030) | - | 1634419..1635042 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB179_RS08045 (AB179_08035) | - | 1635039..1635368 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB179_RS08050 (AB179_08040) | - | 1635368..1636354 (-) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| AB179_RS08055 (AB179_08045) | - | 1636351..1636554 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=147392 AB179_RS08015 WP_000844410.1 1631316..1631615(-) (comGE) [Staphylococcus aureus strain ZJ5499]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=147392 AB179_RS08015 WP_000844410.1 1631316..1631615(-) (comGE) [Staphylococcus aureus strain ZJ5499]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |