Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SpyM6JRS4_RS05795 Genome accession   NZ_CP011414
Coordinates   1162729..1163766 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes JRS4     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1157729..1168766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SpyM6JRS4_RS05775 (SpyM6JRS4_05770) - 1158478..1159104 (+) 627 WP_011184760.1 A24 family peptidase -
  SpyM6JRS4_RS05780 (SpyM6JRS4_05775) rlmN 1159186..1160265 (-) 1080 WP_011184761.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SpyM6JRS4_RS05785 (SpyM6JRS4_05780) - 1160269..1160889 (-) 621 WP_002992791.1 YutD family protein -
  SpyM6JRS4_RS05790 (SpyM6JRS4_05785) - 1161337..1162313 (-) 977 Protein_1116 LacI family DNA-binding transcriptional regulator -
  SpyM6JRS4_RS05795 (SpyM6JRS4_05790) sepM 1162729..1163766 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  SpyM6JRS4_RS05800 (SpyM6JRS4_05795) coaD 1163753..1164244 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  SpyM6JRS4_RS05805 (SpyM6JRS4_05800) rsmD 1164234..1164773 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SpyM6JRS4_RS05810 (SpyM6JRS4_05805) asnA 1164896..1165888 (-) 993 WP_011184764.1 aspartate--ammonia ligase -
  SpyM6JRS4_RS05815 (SpyM6JRS4_05810) arcC 1166201..1167151 (-) 951 WP_011018011.1 carbamate kinase -
  SpyM6JRS4_RS05820 (SpyM6JRS4_05815) - 1167171..1168502 (-) 1332 WP_011184765.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=145758 SpyM6JRS4_RS05795 WP_010922499.1 1162729..1163766(-) (sepM) [Streptococcus pyogenes JRS4]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=145758 SpyM6JRS4_RS05795 WP_010922499.1 1162729..1163766(-) (sepM) [Streptococcus pyogenes JRS4]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment