Detailed information NTG0140396

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: RDF_RS04380
• Genome accession: NZ_CP010867
• Coordinates: 836362..837309 (+)
• Length: 315 a.a.
• NCBI ID: WP_000903642.1
• Uniprot ID: A0AAV3JK20
• Organism: Streptococcus agalactiae strain SS1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 831362..842309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDF_RS04355 (RDF_0809)	-	831711..832391 (+)	681	WP_000656582.1	VIT1/CCC1 transporter family protein	-
RDF_RS04360 (RDF_0810)	-	832542..833243 (+)	702	WP_001263956.1	glucosamine-6-phosphate deaminase	-
RDF_RS04365 (RDF_0811)	-	833315..834271 (-)	957	WP_000523788.1	glutathione S-transferase family protein	-
RDF_RS04370 (RDF_0812)	-	834367..835086 (+)	720	WP_001234956.1	16S rRNA pseudouridine(516) synthase	-
RDF_RS04375 (RDF_0813)	-	835159..836310 (+)	1152	WP_001086200.1	MFS transporter	-
RDF_RS04380 (RDF_0814)	coiA	836362..837309 (+)	948	WP_000903642.1	competence protein CoiA	Machinery gene
RDF_RS04385 (RDF_0815)	pepF	837325..839130 (+)	1806	WP_001282902.1	oligoendopeptidase F	Regulator
RDF_RS04390 (RDF_0816)	-	839325..839951 (+)	627	WP_000736935.1	HAD hydrolase-like protein	-
RDF_RS04395 (RDF_0817)	-	840025..840732 (+)	708	WP_000250853.1	O-methyltransferase	-
RDF_RS04400 (RDF_0818)	prsA	840793..841722 (+)	930	WP_000857822.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 37807.57 Da
• Isoelectric Point: 9.5842

>NTDB_id=140396 RDF_RS04380 WP_000903642.1 836362..837309(+) (coiA) [Streptococcus agalactiae strain SS1]
MLIAKDKQGNLINLLESHPGKGQYFCPTCCSAVRLKAGRIMRRHFAHISLKNCQFYHENESNEHLQLKAKLYMSLSRENE
TMLEHHLPEINQIADLFVNETLALEVQCSRLSEQRLRERTKAYLQADFQVRWLLGEKLWLKHRLTNLHKQFLQFSQSIGF
HIWELDLRLEVLRLKYLIYEDLRGHVYYLSKTCPLSGDVLAFLKWPYQSKNLNFYKVKQDRNIRDYVRQQLRYGNQFWLR
KQEKAYLSGQNLLTQELMMFFPQIQPPRVDTDFCQITNSLTSFYQNFTNYYQKNKNNLDQTLYPPVFYDKIVTKN

Nucleotide

• Length: 948 bp

>NTDB_id=140396 RDF_RS04380 WP_000903642.1 836362..837309(+) (coiA) [Streptococcus agalactiae strain SS1]
ATGTTAATTGCTAAAGACAAACAAGGAAATTTAATTAATCTACTCGAGTCTCATCCGGGAAAGGGACAGTATTTTTGTCC
AACTTGTTGTTCAGCTGTAAGGTTAAAGGCAGGTCGAATCATGAGAAGACACTTTGCACATATTAGTCTAAAAAATTGTC
AGTTTTATCATGAAAATGAGTCTAATGAGCACTTGCAATTAAAAGCAAAGTTATATATGAGTTTAAGTAGAGAGAATGAA
ACTATGCTCGAGCATCATTTGCCAGAAATTAATCAGATTGCAGATTTATTTGTGAATGAGACATTGGCTTTAGAAGTTCA
GTGTAGCCGACTATCAGAGCAGCGACTCAGGGAGCGAACAAAAGCATATCTACAGGCAGACTTTCAAGTGAGATGGTTAC
TAGGGGAAAAACTCTGGTTAAAGCATCGTTTAACAAATCTACATAAACAATTTTTACAATTTTCTCAAAGTATCGGATTT
CATATTTGGGAGTTAGATTTGAGGTTAGAAGTACTGAGACTAAAATATTTGATTTACGAAGATTTACGCGGACATGTCTA
TTACTTAAGTAAAACTTGCCCTCTTAGTGGAGACGTTCTAGCATTTTTGAAGTGGCCATACCAATCAAAAAATCTAAATT
TTTATAAGGTTAAACAAGACAGAAATATCAGAGATTATGTGCGTCAGCAGTTACGCTATGGCAATCAATTTTGGTTACGA
AAACAAGAAAAGGCCTACCTTTCTGGTCAGAATCTATTGACCCAAGAGCTAATGATGTTTTTTCCTCAAATACAGCCACC
ACGTGTAGATACTGATTTTTGTCAAATAACAAATTCTCTAACATCGTTTTATCAGAATTTTACAAATTATTATCAAAAAA
ATAAGAATAACTTAGACCAAACACTTTATCCCCCTGTATTTTATGATAAAATAGTCACTAAGAATTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	49.051	100	0.492
coiA	Streptococcus pneumoniae Rx1	49.051	100	0.492
coiA	Streptococcus pneumoniae D39	49.051	100	0.492
coiA	Streptococcus pneumoniae R6	49.051	100	0.492
coiA	Streptococcus mitis NCTC 12261	49.051	100	0.492
coiA	Lactococcus lactis subsp. cremoris KW2	40.062	100	0.41