Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC33_RS05090 | Genome accession | NZ_CP010506 |
| Coordinates | 963016..963318 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC527 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 958016..968318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC33_RS05065 (RC33_05060) | rpsR | 958378..958638 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC33_RS05070 (RC33_05065) | lon | 958699..961074 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC33_RS05075 (RC33_05070) | - | 961091..961738 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC33_RS05080 (RC33_05075) | fliW | 961899..962288 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC33_RS05085 (RC33_05080) | proC | 962288..963019 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC33_RS05090 (RC33_05085) | ctsT | 963016..963318 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC33_RS05095 (RC33_05090) | - | 963315..963977 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC33_RS05100 (RC33_05095) | - | 963974..964426 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC33_RS05105 (RC33_05100) | hemD | 964423..965052 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC33_RS05110 (RC33_05105) | thiE | 965030..965662 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC33_RS05115 (RC33_05110) | thiD | 965652..966464 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC33_RS05120 (RC33_05115) | - | 966461..967147 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC33_RS05125 (RC33_05120) | - | 967144..967905 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138703 RC33_RS05090 WP_002932767.1 963016..963318(+) (ctsT) [Campylobacter jejuni strain CJ677CC527]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138703 RC33_RS05090 WP_002932767.1 963016..963318(+) (ctsT) [Campylobacter jejuni strain CJ677CC527]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |