Detailed information NTG0137640

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: AEI16_RS05705
• Genome accession: NZ_CP012957
• Coordinates: 1075845..1076795 (+)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CJ001CC354
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1070845..1081795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AEI16_RS05685 (AEI16_05645)	galE	1071663..1072637 (-)	975	WP_260627597.1	UDP-glucose 4-epimerase GalE	-
AEI16_RS05690 (AEI16_05650)	-	1072634..1073932 (-)	1299	WP_260627598.1	UDP-glucose dehydrogenase family protein	-
AEI16_RS05695 (AEI16_05655)	-	1073938..1074894 (-)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
AEI16_RS05700 (AEI16_05660)	-	1074965..1075786 (-)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
AEI16_RS05705 (AEI16_05665)	waaF	1075845..1076795 (+)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
AEI16_RS05710 (AEI16_05670)	-	1076781..1077545 (-)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
AEI16_RS05715 (AEI16_05675)	gmhA	1077545..1078105 (-)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
AEI16_RS05720 (AEI16_05680)	rfaE1	1078102..1079487 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
AEI16_RS05725 (AEI16_05685)	rfaD	1079480..1080433 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
AEI16_RS05730 (AEI16_05690)	gmhB	1080434..1080995 (-)	562	Protein_1111	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
AEI16_RS05735 (AEI16_05695)	-	1081076..1081378 (+)	303	WP_002852762.1	c-type cytochrome	-
AEI16_RS05740 (AEI16_05700)	ccoS	1081401..1081607 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=137640 AEI16_RS05705 WP_002867402.1 1075845..1076795(+) (waaF) [Campylobacter jejuni strain CJ001CC354]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=137640 AEI16_RS05705 WP_002867402.1 1075845..1076795(+) (waaF) [Campylobacter jejuni strain CJ001CC354]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918