Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SanJ4211_RS02235 Genome accession   NZ_CP012805
Coordinates   429393..430169 (-) Length   258 a.a.
NCBI ID   WP_003025796.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4211     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 424393..435169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS02205 (SanJ4211_0411) - 424765..425760 (+) 996 WP_021001360.1 sensor histidine kinase -
  SanJ4211_RS02210 (SanJ4211_0412) vraR 425762..426394 (+) 633 WP_021001361.1 response regulator transcription factor Regulator
  SanJ4211_RS02215 (SanJ4211_0413) - 426434..427834 (+) 1401 WP_057489579.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  SanJ4211_RS02220 (SanJ4211_0414) - 427836..428210 (+) 375 WP_021001363.1 S1 RNA-binding domain-containing protein -
  SanJ4211_RS02225 (SanJ4211_0415c) - 428336..428653 (-) 318 WP_041784094.1 DUF960 domain-containing protein -
  SanJ4211_RS02230 (SanJ4211_0416c) - 428773..429306 (-) 534 WP_003025799.1 DUF402 domain-containing protein -
  SanJ4211_RS02235 (SanJ4211_0417c) recX 429393..430169 (-) 777 WP_003025796.1 recombination regulator RecX Regulator
  SanJ4211_RS02240 (SanJ4211_0418c) - 430232..431008 (-) 777 WP_003025794.1 aminoglycoside 3'-phosphotransferase -
  SanJ4211_RS02245 (SanJ4211_0419) rlmD 431065..432423 (+) 1359 WP_021001366.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SanJ4211_RS02250 (SanJ4211_0420) - 432494..432910 (+) 417 Protein_415 cytidine deaminase family protein -
  SanJ4211_RS02255 (SanJ4211_0421c) - 433201..434133 (-) 933 WP_057489580.1 nitronate monooxygenase -
  SanJ4211_RS02260 (SanJ4211_0422) - 434446..434679 (+) 234 WP_003025778.1 DUF1858 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30309.85 Da        Isoelectric Point: 9.0671

>NTDB_id=136496 SanJ4211_RS02235 WP_003025796.1 429393..430169(-) (recX) [Streptococcus anginosus strain J4211]
MKITKIEKKKRLYLLELDETDKLYITEDTIVHFMLSKGMNISEQELKEIQDYAQFSYGKNLALYYLSFKQRTVKEVRDYL
TKHGISLDTIEKVLTILIKDNWIDDRQYAYSFIHSNLLSGDKGAFVLKQKLAQKGITAPIIDEELCKFDFTEVSQKVAQK
LLKKYQGKLPTKALHDKILQQLINKGFSYEEAKVAYQNLTIEDDDGNQQELLYKELDKQYRKYSKKYDGYDLKQRLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=136496 SanJ4211_RS02235 WP_003025796.1 429393..430169(-) (recX) [Streptococcus anginosus strain J4211]
ATGAAAATCACTAAAATTGAAAAGAAAAAGCGTCTCTATCTTTTAGAATTGGACGAAACTGACAAACTTTACATCACTGA
AGATACCATCGTTCACTTTATGTTATCAAAAGGCATGAACATCAGTGAGCAAGAATTAAAAGAAATTCAGGACTACGCAC
AGTTTTCTTACGGAAAAAATCTAGCTCTATATTATCTTTCTTTCAAGCAAAGAACTGTCAAAGAAGTGCGGGATTATTTG
ACAAAACACGGGATTTCCTTAGATACCATCGAGAAAGTGCTAACGATTCTCATAAAAGATAACTGGATAGATGACAGACA
ATATGCTTATTCCTTTATTCATTCCAATCTTCTATCTGGTGATAAAGGTGCTTTTGTCCTCAAGCAAAAATTAGCTCAAA
AAGGTATCACAGCTCCTATTATTGATGAAGAATTATGCAAATTTGATTTTACAGAAGTAAGTCAAAAAGTTGCTCAGAAA
TTACTCAAAAAATATCAAGGGAAGCTCCCGACAAAAGCACTTCACGATAAAATCTTACAACAGCTCATCAATAAAGGTTT
TTCCTATGAAGAAGCAAAAGTGGCATACCAAAACCTCACGATAGAAGATGATGATGGAAACCAGCAAGAATTGCTTTACA
AAGAATTAGACAAACAATACCGCAAGTATTCTAAAAAATACGATGGCTATGATTTAAAACAACGGCTCACCCAAGCACTC
GCACGCAAAGGCTACGATTTTTCTGATATTGCTAGCGCTCTCAGAGAATATCTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364