Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RM30_RS07605 | Genome accession | NZ_CP010296 |
| Coordinates | 1654033..1654332 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain ATCC BAA1680 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1649033..1659332
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM30_RS07585 (RM30_08155) | gcvPA | 1650245..1651591 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RM30_RS07590 (RM30_08160) | gcvT | 1651611..1652702 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RM30_RS07595 (RM30_08165) | - | 1652861..1653385 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| RM30_RS14405 (RM30_08170) | - | 1653375..1653521 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RM30_RS07600 (RM30_08175) | comGF | 1653618..1654115 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RM30_RS07605 (RM30_08180) | comGE | 1654033..1654332 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RM30_RS07610 (RM30_08185) | comGD | 1654319..1654765 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RM30_RS07615 (RM30_08190) | comGC | 1654743..1655054 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RM30_RS07620 (RM30_08195) | comGB | 1655068..1656138 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RM30_RS07625 (RM30_08200) | comGA | 1656110..1657084 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RM30_RS07630 (RM30_08205) | - | 1657136..1657759 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RM30_RS07635 (RM30_08210) | - | 1657756..1658085 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RM30_RS07640 (RM30_08215) | - | 1658085..1659071 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RM30_RS07645 (RM30_08220) | - | 1659068..1659271 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=135897 RM30_RS07605 WP_000844413.1 1654033..1654332(-) (comGE) [Staphylococcus aureus strain ATCC BAA1680]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=135897 RM30_RS07605 WP_000844413.1 1654033..1654332(-) (comGE) [Staphylococcus aureus strain ATCC BAA1680]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |