Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | IX88_RS00720 | Genome accession | NZ_CP009256 |
| Coordinates | 140581..141222 (-) | Length | 213 a.a. |
| NCBI ID | WP_000201224.1 | Uniprot ID | A0A009T8N7 |
| Organism | Acinetobacter baumannii strain AB31 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 135581..146222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX88_RS00700 (IX88_00710) | aroK | 136497..137066 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| IX88_RS00705 (IX88_00715) | pilQ | 137078..139243 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| IX88_RS00710 (IX88_00720) | pilP | 139306..139833 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| IX88_RS00715 (IX88_00725) | pilO | 139844..140584 (-) | 741 | WP_038405377.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| IX88_RS00720 (IX88_00730) | pilN | 140581..141222 (-) | 642 | WP_000201224.1 | PilN domain-containing protein | Machinery gene |
| IX88_RS00725 (IX88_00735) | pilM | 141222..142280 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| IX88_RS00730 (IX88_00740) | ponA | 142442..144997 (+) | 2556 | WP_038405378.1 | penicillin-binding protein PBP1a | - |
| IX88_RS00735 (IX88_00745) | - | 145015..145839 (-) | 825 | WP_001990541.1 | putative RNA methyltransferase | - |
| IX88_RS00740 (IX88_00750) | - | 145842..146174 (-) | 333 | WP_000169598.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24029.39 Da Isoelectric Point: 5.3968
>NTDB_id=127653 IX88_RS00720 WP_000201224.1 140581..141222(-) (pilN) [Acinetobacter baumannii strain AB31]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPPAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPPAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=127653 IX88_RS00720 WP_000201224.1 140581..141222(-) (pilN) [Acinetobacter baumannii strain AB31]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTGGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCACCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCTGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTGGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCACCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCTGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
99.531 |
100 |
0.995 |
| comN | Acinetobacter baylyi ADP1 |
71.429 |
98.592 |
0.704 |