Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | WV34_RS09650 | Genome accession | NZ_CP011252 |
| Coordinates | 1934157..1934519 (+) | Length | 120 a.a. |
| NCBI ID | WP_013352421.1 | Uniprot ID | A0A9P1JH52 |
| Organism | Bacillus amyloliquefaciens strain MT45 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1929157..1939519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WV34_RS09620 (WV34_09410) | - | 1929615..1929848 (+) | 234 | WP_088612879.1 | DUF896 domain-containing protein | - |
| WV34_RS09625 (WV34_09415) | recP/tkt | 1930015..1932018 (+) | 2004 | WP_065521211.1 | transketolase | Machinery gene |
| WV34_RS09630 (WV34_09420) | sirA | 1932169..1932615 (+) | 447 | WP_088612880.1 | sporulation inhibitor of replication protein SirA | - |
| WV34_RS09635 (WV34_09425) | - | 1932701..1932919 (+) | 219 | WP_003153994.1 | YneF family protein | - |
| WV34_RS09640 (WV34_09430) | - | 1932992..1933165 (-) | 174 | WP_088030684.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| WV34_RS09645 (WV34_09435) | - | 1933504..1934072 (+) | 569 | Protein_1844 | cytochrome c biogenesis protein CcdA | - |
| WV34_RS09650 (WV34_09440) | pilH | 1934157..1934519 (+) | 363 | WP_013352421.1 | response regulator | Machinery gene |
| WV34_RS09655 (WV34_09445) | - | 1934599..1935090 (+) | 492 | WP_088030532.1 | CcdC protein domain-containing protein | - |
| WV34_RS09660 (WV34_09450) | - | 1935118..1935546 (-) | 429 | WP_013352423.1 | DUF2621 domain-containing protein | - |
| WV34_RS09665 (WV34_09455) | - | 1935781..1936152 (-) | 372 | WP_065521208.1 | spore coat protein | - |
| WV34_RS09670 (WV34_09460) | - | 1936246..1936392 (-) | 147 | WP_003153984.1 | small acid-soluble spore protein P | - |
| WV34_RS09675 (WV34_09465) | sspO | 1936422..1936568 (-) | 147 | WP_003153982.1 | acid-soluble spore protein SspO | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13259.62 Da Isoelectric Point: 5.2063
>NTDB_id=126802 WV34_RS09650 WP_013352421.1 1934157..1934519(+) (pilH) [Bacillus amyloliquefaciens strain MT45]
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
Nucleotide
Download Length: 363 bp
>NTDB_id=126802 WV34_RS09650 WP_013352421.1 1934157..1934519(+) (pilH) [Bacillus amyloliquefaciens strain MT45]
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATCCGTCCCGACCTGGTGACAATGGATA
TTACCATGCCAGTCAAAAACGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACCGCCATGCGGCAGCAGCGGATCGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCAGTAGGCAGGGTAACGGGAACGTAA
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATCCGTCCCGACCTGGTGACAATGGATA
TTACCATGCCAGTCAAAAACGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACCGCCATGCGGCAGCAGCGGATCGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCAGTAGGCAGGGTAACGGGAACGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.667 |
100 |
0.367 |