Detailed information NTG0125969

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AMD19_RS09325
• Genome accession: NZ_CP008992
• Coordinates: 1989133..1990167 (+)
• Length: 344 a.a.
• NCBI ID: WP_011051113.1
• Uniprot ID: P0A0W4
• Organism: Xanthomonas citri subsp. citri UI6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1984133..1995167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMD19_RS09310 (J158_01880)	-	1985628..1986122 (+)	495	WP_003481865.1	CinA family protein	-
AMD19_RS09315 (J158_01881)	ubiB	1986557..1988233 (+)	1677	WP_003481867.1	2-polyprenylphenol 6-hydroxylase	-
AMD19_RS09320 (J158_01882)	lexA	1988319..1988960 (+)	642	WP_005915033.1	transcriptional repressor LexA	-
AMD19_RS09325 (J158_01883)	recA	1989133..1990167 (+)	1035	WP_011051113.1	recombinase RecA	Machinery gene
AMD19_RS09330 (J158_01884)	recX	1990480..1990968 (+)	489	WP_003481873.1	recombination regulator RecX	-
AMD19_RS09335 (J158_01885)	alaS	1991070..1993718 (+)	2649	WP_011051114.1	alanine--tRNA ligase	-
AMD19_RS09340 (J158_01886)	csrA	1993858..1994070 (+)	213	WP_003481884.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37166.62 Da
• Isoelectric Point: 4.9759

>NTDB_id=125969 AMD19_RS09325 WP_011051113.1 1989133..1990167(+) (recA) [Xanthomonas citri subsp. citri UI6]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNSQVATRL
EAELREKFQPAEAPREAGDDEDKE

Nucleotide

• Length: 1035 bp

>NTDB_id=125969 AMD19_RS09325 WP_011051113.1 1989133..1990167(+) (recA) [Xanthomonas citri subsp. citri UI6]
ATGGACGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCGGTCATGCG
CATGGGCGACCGCGTCATTGAGGCGGTCGAAGTCATCCCGACCGGCTCGCTGATGCTGGATATCGCCCTGGGGATCGGCG
GCCTGCCGAAGGGTCGCGTGGTCGAAATCTACGGCCCGGAATCCTCCGGCAAGACCACCTTGACCCTGCAAGCCATCGCC
GAGTGCCAGAAGAACGGCGGCACCGCTGCCTTCATCGATGCCGAGCACGCACTGGACCCGATTTATGCGGCCAAGCTGGG
CGTCAATGTCGACGACCTGCTGCTGTCGCAGCCGGATACCGGTGAGCAGGCACTGGAAATTGCCGACATGCTGGTGCGTT
CGGGTTCGGTTGATATCGTGGTGGTCGACTCGGTCGCTGCACTGACGCCGAAGGCGGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCAGGTTTGCAGGCTCGCTTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAATATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAATCAGCTGCGCATGAAGATCGGCGTCATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCGGTGCGTCTGGATATCCGCCGTATCGGTGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTGTATGGCGA
AGGCATCAGTCGCGAGGGCGAATTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCCGGCGCCTGGTACAGCT
ATGGCGATGAGCGCATCGGGCAGGGCAAGGACAACGCGCGAACCTACCTGCGCGACAACTCGCAGGTTGCGACCCGGCTG
GAAGCGGAGCTGCGTGAGAAGTTCCAACCTGCCGAAGCACCGCGTGAAGCCGGCGACGACGAAGACAAGGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: P0A0W4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	70.349	100	0.703
recA	Pseudomonas stutzeri DSM 10701	70.326	97.965	0.689
recA	Acinetobacter baumannii D1279779	71.951	95.349	0.686
recA	Ralstonia pseudosolanacearum GMI1000	75.399	90.988	0.686
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.552	94.767	0.669
recA	Vibrio cholerae strain A1552	70.552	94.767	0.669
recA	Neisseria gonorrhoeae MS11	68.712	94.767	0.651
recA	Neisseria gonorrhoeae MS11	68.712	94.767	0.651
recA	Neisseria gonorrhoeae strain FA1090	68.712	94.767	0.651
recA	Glaesserella parasuis strain SC1401	64.826	100	0.648
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Latilactobacillus sakei subsp. sakei 23K	62.275	97.093	0.605
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.375	93.023	0.599
recA	Helicobacter pylori strain NCTC11637	62.048	96.512	0.599
recA	Helicobacter pylori 26695	61.747	96.512	0.596
recA	Bacillus subtilis subsp. subtilis str. 168	62.769	94.477	0.593
recA	Streptococcus pneumoniae Rx1	60.976	95.349	0.581
recA	Streptococcus mitis SK321	60.976	95.349	0.581
recA	Streptococcus pneumoniae D39	60.976	95.349	0.581
recA	Streptococcus pneumoniae R6	60.976	95.349	0.581
recA	Streptococcus pneumoniae TIGR4	60.976	95.349	0.581
recA	Streptococcus mitis NCTC 12261	60.671	95.349	0.578
recA	Streptococcus pyogenes NZ131	60.303	95.93	0.578
recA	Streptococcus mutans UA159	60	95.93	0.576
recA	Lactococcus lactis subsp. cremoris KW2	59.385	94.477	0.561
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.182	95.93	0.558