Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   GZ22_RS16400 Genome accession   NZ_CP008876
Coordinates   3305699..3306649 (+) Length   316 a.a.
NCBI ID   WP_038564812.1    Uniprot ID   A0AAX2EET6
Organism   Terribacillus goriensis strain MP602     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3300699..3311649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZ22_RS16370 (GZ22_16995) - 3301663..3302283 (+) 621 WP_038564801.1 DedA family protein -
  GZ22_RS16375 (GZ22_17000) - 3302296..3303144 (+) 849 WP_038564803.1 undecaprenyl-diphosphate phosphatase -
  GZ22_RS18685 - 3303241..3303411 (+) 171 WP_164072109.1 hypothetical protein -
  GZ22_RS16380 (GZ22_17010) - 3303408..3303629 (+) 222 WP_038564806.1 alpha/beta-type small acid-soluble spore protein -
  GZ22_RS18325 - 3303679..3303810 (+) 132 WP_084160843.1 YfhD family protein -
  GZ22_RS16385 (GZ22_17020) - 3303890..3304492 (+) 603 WP_051748569.1 spore coat protein -
  GZ22_RS16390 (GZ22_17025) tlp 3304523..3304756 (-) 234 WP_038564808.1 small acid-soluble spore protein Tlp -
  GZ22_RS16395 (GZ22_17030) - 3304812..3305546 (-) 735 WP_038564810.1 YqcI/YcgG family protein -
  GZ22_RS16400 (GZ22_17035) ceuB 3305699..3306649 (+) 951 WP_038564812.1 ABC transporter permease Machinery gene
  GZ22_RS16405 (GZ22_17040) - 3306642..3307592 (+) 951 WP_038564815.1 iron chelate uptake ABC transporter family permease subunit -
  GZ22_RS16410 (GZ22_17045) - 3307589..3308344 (+) 756 WP_038564818.1 ATP-binding cassette domain-containing protein -
  GZ22_RS16415 (GZ22_17050) - 3308441..3309382 (+) 942 WP_038564820.1 siderophore ABC transporter substrate-binding protein -
  GZ22_RS16420 (GZ22_17055) - 3309426..3310493 (-) 1068 WP_038564823.1 nitric oxide synthase oxygenase -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34817.00 Da        Isoelectric Point: 7.6208

>NTDB_id=125396 GZ22_RS16400 WP_038564812.1 3305699..3306649(+) (ceuB) [Terribacillus goriensis strain MP602]
MKLIYLFIITVLLAVCSLFVGVENVSFSALWNMDEEAWNIVMISRLPRMLSIIMAGTSLSICGLIMQQLTQNKFVSPTTA
GTMDWARLGILVSLLFFTDASPIWKMCIAAAFALFGTLLFMGILQRLKQKDTIFIPLVGIMLGNVVSSIATFFALKFDLV
QNMSSWLQGDFSLIMEGRYELLYISVPLLIIAFLFANMFTVAGMGEDFATNLGLPYKYVVNVGLIIVAIITAVVILTVGV
IPFLGLIVPNIVSIYRGDNLKNSIWHTAVLGAAFLLVCDIAGRLIIYPYEISVGLMVGVIGTGIFLYMLLRRNAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=125396 GZ22_RS16400 WP_038564812.1 3305699..3306649(+) (ceuB) [Terribacillus goriensis strain MP602]
ATGAAGTTGATTTACTTGTTTATTATTACCGTTCTATTAGCAGTTTGTTCCCTGTTTGTCGGAGTGGAAAACGTATCCTT
CTCTGCATTGTGGAACATGGATGAGGAAGCCTGGAATATTGTTATGATCAGCCGCTTGCCGCGGATGCTCAGCATCATCA
TGGCTGGTACAAGTCTTAGCATATGCGGACTGATAATGCAGCAGCTTACGCAGAACAAATTCGTATCTCCGACAACTGCG
GGGACGATGGATTGGGCTAGATTAGGAATTCTTGTTTCCTTGCTATTCTTCACCGATGCAAGCCCGATATGGAAAATGTG
TATCGCAGCTGCTTTTGCTTTATTCGGCACCTTGCTCTTTATGGGAATTCTCCAGAGACTGAAGCAGAAGGATACGATTT
TCATACCGCTGGTCGGAATTATGCTGGGAAATGTGGTCAGTTCCATTGCAACATTTTTTGCACTCAAGTTTGATCTGGTT
CAAAATATGTCCTCTTGGCTTCAAGGAGATTTTTCTTTGATTATGGAAGGACGCTATGAGCTTCTTTACATAAGTGTACC
GCTTCTAATTATTGCTTTTTTATTTGCAAATATGTTCACAGTTGCCGGAATGGGAGAAGATTTCGCTACAAATCTTGGTC
TTCCTTATAAATATGTAGTGAACGTAGGTTTGATTATTGTCGCAATTATTACAGCAGTGGTCATTCTGACAGTAGGTGTC
ATTCCTTTTCTCGGTTTGATTGTCCCAAATATCGTAAGTATATATCGCGGTGACAATTTAAAGAACAGCATTTGGCATAC
AGCTGTTCTTGGTGCAGCATTCCTGCTCGTATGTGATATAGCAGGGCGCTTGATCATCTATCCATATGAAATCTCGGTAG
GTCTCATGGTTGGCGTCATTGGCACAGGTATCTTCCTTTATATGCTGTTAAGGAGAAACGCCTATGCTTAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497


Multiple sequence alignment