Detailed information NTG1170794

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACOFKY_RS17995
• Genome accession: NZ_OZ241355
• Coordinates: 3886894..3887952 (+)
• Length: 352 a.a.
• NCBI ID: WP_336953691.1
• Uniprot ID: -
• Organism: MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3881894..3892952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOFKY_RS17980	mraY	3882132..3883250 (+)	1119	WP_419819872.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
ACOFKY_RS17985	-	3883323..3884126 (+)	804	WP_336953689.1	putative RNA methyltransferase	-
ACOFKY_RS17990	ponA	3884187..3886730 (-)	2544	WP_336953690.1	penicillin-binding protein PBP1a	-
ACOFKY_RS17995	comM	3886894..3887952 (+)	1059	WP_336953691.1	pilus assembly protein PilM	Machinery gene
ACOFKY_RS18000	pilN	3887952..3888593 (+)	642	WP_336953692.1	PilN domain-containing protein	Machinery gene
ACOFKY_RS18005	pilO	3888590..3889339 (+)	750	WP_336953693.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACOFKY_RS18010	pilP	3889336..3889866 (+)	531	WP_419327977.1	pilus assembly protein PilP	Machinery gene
ACOFKY_RS18015	pilQ	3889888..3892089 (+)	2202	WP_336953695.1	type IV pilus secretin PilQ family protein	Machinery gene
ACOFKY_RS18020	aroK	3892126..3892668 (+)	543	WP_004725433.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39045.75 Da
• Isoelectric Point: 4.5366

>NTDB_id=1170794 ACOFKY_RS17995 WP_336953691.1 3886894..3887952(+) (comM) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
MLRLYRKPNKGLIGVDISSTTVKILELSVKNGRYWVESYGLSPLLDGSVVEKNILNPEAVADALERAVNIANPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLKDKLANPNRVNVLLVATRAENIDSRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQNRYGLSYDE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDLRKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1170794 ACOFKY_RS17995 WP_336953691.1 3886894..3887952(+) (comM) [MAG: Acinetobacter sp. isolate 91b77bb6-a760-4576-a270-dd86adb6cd71]
GTGCTTAGACTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCTACTACTGTAAAGATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGGTTAAGCCCTCTGCTGGATGGGAGTGTTGTTGAAAAAAACA
TTCTTAATCCTGAAGCAGTGGCTGATGCGTTGGAAAGGGCAGTCAATATTGCCAATCCTCAATCACAAAATGTCGCGGTT
GCTGTACCTACTTCTATGGTGATTCACAAAATCATTGAAATGGATGCAGATATGTCGGATGAGGAGAGAGAAGTTCAGAT
CCGAATGGATGCTGAACAATATATTCCTTTTCCATTAGATGAAGTCAGTTTAGATTTTGAAGTTTTAAAAGATAAGCTAG
CAAATCCAAATCGAGTCAATGTATTACTCGTTGCAACACGTGCAGAAAATATCGATTCTCGTGTTGAAGTTTTAGAAATC
GCAGGCTTGTCACCCAAAATCGCAGATGTAGAAAGCTATGCAATTGAGCGTGCTTTTGATGTCTTTTCTGATACCTTGCC
AATTGGTGTAAATCTTGTGGGTATTCTAGATATTGGTCATACCATGACGACTTTGTCTGTGATGCAAAATGGCAAGATCA
TTTATACCCGAGAACAAGTTTTTGGTGGCAAGCAGCTGACTCAAGATGTACAGAACCGTTATGGTTTGTCTTATGACGAA
GCTGGTCGTGCCAAAAAAGATCGGACTTTACCTGATGATTTTGAAACAGAAGTTTTAATGCCGTTTTTAGAAGCAGTTGT
ACAACAAGCTGCTCGTTCATTACAGTTTTTCTTTTCATCTTCTCAGTTTAATGAGATTGATCATATTTTACTGGCTGGTG
GAAATGCTAATATTCCTGGTTTGGCAAAATTATTACAACAAAAATTAGGCTATCGCGTCACGATTGCAAATCCTTTCTTG
CAGATGGGATTTTCACCACAAATTGACTTAAGAAAAATAGAAAATGATGCACCTTCTCTAATGGTTGCCTGTGGTTTGGC
GTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.535	100	0.429