Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   ACLV7H_RS02595 Genome accession   NZ_OZ217340
Coordinates   464484..465143 (-) Length   219 a.a.
NCBI ID   WP_411866270.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 459484..470143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS02565 (SORA22_05070) - 459611..460177 (+) 567 WP_411866265.1 aminodeoxychorismate/anthranilate synthase component II -
  ACLV7H_RS02570 (SORA22_05080) trpD 460188..461192 (+) 1005 WP_411866266.1 anthranilate phosphoribosyltransferase -
  ACLV7H_RS02575 (SORA22_05090) trpC 461189..461956 (+) 768 WP_411866267.1 indole-3-glycerol phosphate synthase TrpC -
  ACLV7H_RS02580 (SORA22_05100) - 461943..462542 (+) 600 WP_411866268.1 phosphoribosylanthranilate isomerase -
  ACLV7H_RS02585 (SORA22_05110) trpB 462520..463743 (+) 1224 WP_045592546.1 tryptophan synthase subunit beta -
  ACLV7H_RS02590 (SORA22_05120) trpA 463736..464512 (+) 777 WP_411866269.1 tryptophan synthase subunit alpha -
  ACLV7H_RS02595 (SORA22_05130) cclA/cilC 464484..465143 (-) 660 WP_411866270.1 prepilin peptidase Machinery gene
  ACLV7H_RS02600 (SORA22_05140) - 465213..465668 (+) 456 WP_411866271.1 GNAT family N-acetyltransferase -
  ACLV7H_RS02605 (SORA22_05150) - 465771..466295 (+) 525 WP_411866272.1 thiol-disulfide isomerase -
  ACLV7H_RS02610 (SORA22_05160) - 466366..466887 (+) 522 WP_411866273.1 hypothetical protein -
  ACLV7H_RS02615 (SORA22_05170) - 467107..467310 (-) 204 WP_045592539.1 CsbD family protein -
  ACLV7H_RS02620 (SORA22_05180) - 467352..467948 (-) 597 WP_049484660.1 Asp23/Gls24 family envelope stress response protein -
  ACLV7H_RS02625 (SORA22_05190) - 467960..468130 (-) 171 WP_000454669.1 DUF2273 domain-containing protein -
  ACLV7H_RS02630 (SORA22_05200) amaP 468141..468704 (-) 564 WP_049484704.1 alkaline shock response membrane anchor protein AmaP -
  ACLV7H_RS02635 (SORA22_05210) - 468804..469040 (-) 237 WP_045592533.1 GlsB/YeaQ/YmgE family stress response membrane protein -

Sequence


Protein


Download         Length: 219 a.a.        Molecular weight: 24931.18 Da        Isoelectric Point: 8.3837

>NTDB_id=1169949 ACLV7H_RS02595 WP_411866270.1 464484..465143(-) (cclA/cilC) [Streptococcus oralis isolate S. oralis A22]
MIDLYFFLVGSILASFLGLVIDRFPEQSIIRPASHCDSCQTRLRPLDLIPIISQVIGRFRCRYCKARYPFWYALFELGLG
VLFLAWSWGWLSLGQVILITAGLTLGIYDFRHQEYPLLVWLTFHLILLAFCGWNLVMVFFLILGILAHFIDIRMGSGDFL
FLASCALVFSATELLILIQFASATGILAFLLQKKKERLPFVPFLLLAACLIIFGKLLLV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=1169949 ACLV7H_RS02595 WP_411866270.1 464484..465143(-) (cclA/cilC) [Streptococcus oralis isolate S. oralis A22]
ATGATTGATCTTTATTTTTTTCTTGTCGGGAGCATTCTCGCTTCTTTCTTAGGTTTGGTCATTGACCGTTTTCCTGAGCA
ATCCATTATTCGACCAGCTAGTCACTGCGATTCCTGTCAGACTCGCTTGCGTCCCTTAGATTTGATTCCGATTATCTCTC
AAGTAATTGGTCGCTTTCGCTGTCGCTACTGCAAGGCTCGCTATCCATTCTGGTATGCCCTCTTTGAATTGGGCTTGGGT
GTCCTCTTTCTGGCTTGGTCATGGGGCTGGCTTTCCTTGGGTCAAGTCATCCTAATCACTGCTGGCTTGACCTTAGGTAT
CTACGACTTTCGCCATCAGGAATATCCCTTACTAGTCTGGCTGACGTTCCACCTAATCCTCCTGGCTTTCTGTGGTTGGA
ATCTGGTCATGGTCTTCTTTCTTATCCTTGGAATTTTGGCTCATTTTATCGATATCCGCATGGGCTCAGGGGATTTTCTC
TTTCTGGCTTCTTGTGCTCTCGTCTTTAGCGCGACAGAGTTGCTCATCTTGATTCAGTTTGCTTCTGCGACGGGGATCCT
AGCTTTTCTCCTGCAAAAGAAAAAGGAAAGACTTCCTTTTGTGCCTTTCCTCTTACTTGCTGCTTGTTTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

90.411

100

0.904

  cclA/cilC Streptococcus pneumoniae Rx1

89.498

100

0.895

  cclA/cilC Streptococcus pneumoniae D39

89.498

100

0.895

  cclA/cilC Streptococcus pneumoniae R6

89.498

100

0.895

  cclA/cilC Streptococcus pneumoniae TIGR4

89.041

100

0.89

  cclA/cilC Streptococcus mitis NCTC 12261

87.671

100

0.877


Multiple sequence alignment