Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACI6PI_RS05430 Genome accession   NZ_OY737371
Coordinates   1139820..1141082 (+) Length   420 a.a.
NCBI ID   WP_404280047.1    Uniprot ID   -
Organism   Companilactobacillus paralimentarius strain IMDO BBRM18     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1134820..1146082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI6PI_RS05400 (CPBBRM18_IMEEAPEM_01087) rpsB 1135046..1135849 (+) 804 WP_025085176.1 30S ribosomal protein S2 -
  ACI6PI_RS05405 (CPBBRM18_IMEEAPEM_01088) tsf 1135917..1136792 (+) 876 WP_025085177.1 translation elongation factor Ts -
  ACI6PI_RS05410 (CPBBRM18_IMEEAPEM_01089) pyrH 1136961..1137692 (+) 732 WP_025085178.1 UMP kinase -
  ACI6PI_RS05415 (CPBBRM18_IMEEAPEM_01090) frr 1137685..1138242 (+) 558 WP_025085179.1 ribosome recycling factor -
  ACI6PI_RS05420 (CPBBRM18_IMEEAPEM_01091) - 1138251..1138991 (+) 741 WP_404280045.1 isoprenyl transferase -
  ACI6PI_RS05425 (CPBBRM18_IMEEAPEM_01092) - 1139006..1139800 (+) 795 WP_025085181.1 phosphatidate cytidylyltransferase -
  ACI6PI_RS05430 (CPBBRM18_IMEEAPEM_01093) eeP 1139820..1141082 (+) 1263 WP_404280047.1 RIP metalloprotease RseP Regulator
  ACI6PI_RS05435 (CPBBRM18_IMEEAPEM_01094) - 1141095..1142801 (+) 1707 WP_404280049.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45806.47 Da        Isoelectric Point: 9.7794

>NTDB_id=1160807 ACI6PI_RS05430 WP_404280047.1 1139820..1141082(+) (eeP) [Companilactobacillus paralimentarius strain IMDO BBRM18]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSDIQPG
TMASLVLNDQDKVIKIITSSKVYDANAVPVQISKSDLVDDLVIEGYENGDETVVKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFVLAVLAAILAAFMMNGVATNQLGHIEKNSIAQEAGLKVNDTIVSVNGKKTGSWTALST
NIQNNPGKKVTLKVESNKKLKTIKLTPKSVKSQGQSYGFIGIMPKTDSSAWAKIKYGFSYSWGTTVMVFHALGKMVSGGF
NINQLSGPVGIYSMTSKVASQGIINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYETVITLIGVG
ILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1160807 ACI6PI_RS05430 WP_404280047.1 1139820..1141082(+) (eeP) [Companilactobacillus paralimentarius strain IMDO BBRM18]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGAATATTAGTTATTGTCCATGAATTTGGACATTATTATGCTGCCAA
AAAATCAGGAATTTTGGTTCGTGAGTTTTCTGTAGGAATGGGTCCGAAAATCGTCGCTTACCGTAAGAATCATACGACAT
ACACATTGAGATTATTACCTTTAGGTGGATATGTACGTATGGCTGGTGCTCAGGAAGATGATTCTGATATTCAACCAGGA
ACGATGGCATCTTTAGTATTAAATGATCAAGATAAAGTAATAAAAATAATAACTTCCAGTAAGGTTTATGATGCAAATGC
GGTCCCCGTTCAAATTTCTAAATCAGATTTAGTCGATGATTTAGTGATTGAAGGGTATGAAAATGGCGACGAAACTGTCG
TTAAGAAATATTCAGTTGATCATGATGCAACAATTGTTGAAGAAGACGGTACTGAGGTTCAAATCGCACCACGCGATGTT
CAACTTCAGTCCGTTTCTGTTTGGAAGCGAATGATTACTAATTTTGCAGGTCCTTTCAATAATTTTGTTCTAGCAGTTTT
GGCAGCTATTTTAGCTGCTTTCATGATGAATGGTGTTGCCACTAATCAATTAGGTCATATCGAAAAGAATTCAATTGCTC
AAGAAGCAGGTTTGAAGGTTAACGATACGATTGTAAGTGTGAATGGCAAGAAGACTGGTTCATGGACTGCTTTATCAACT
AACATTCAAAATAACCCTGGTAAGAAAGTTACTTTAAAAGTTGAATCAAATAAAAAACTTAAAACAATTAAATTAACTCC
TAAGTCTGTTAAGTCACAAGGTCAAAGCTATGGGTTTATTGGTATTATGCCAAAAACTGATTCAAGTGCTTGGGCTAAGA
TTAAGTACGGCTTTTCATATAGTTGGGGAACGACCGTAATGGTGTTCCATGCATTAGGTAAAATGGTATCCGGTGGTTTT
AATATTAATCAATTATCAGGTCCGGTGGGGATCTACTCGATGACTTCAAAAGTGGCATCACAAGGTATTATTAATATTAT
TTTATTTACATCAATGCTATCGATGAATCTAGGTATTGTTAATTTAATTCCAATTCCAGCCTTAGATGGTGGAAAAATTT
TATTAAATATCGTTGAAGCAATCAGAAGAAAACCAATTCCCGAACAGTATGAAACTGTTATTACACTGATTGGTGTCGGA
ATTCTAGTCTTGTTGATGATTGCTGTTACATGGAATGATATTCAGCGCTTCTTTATAAAATAG

Domains


Predicted by InterproScan.

(208-255)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.495

  eeP Streptococcus thermophilus LMD-9

48.364

100

0.493


Multiple sequence alignment