Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP57_RS08030 Genome accession   NZ_OX419573
Coordinates   1511711..1512286 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6085     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506711..1517286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP57_RS08000 (NRS6085_07985) dapD 1506898..1507608 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP57_RS08005 (NRS6085_07990) dapI 1507678..1508802 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  KJP57_RS08010 (NRS6085_07995) ykuS 1508864..1509109 (+) 246 WP_003232382.1 YkuS family protein -
  KJP57_RS08015 (NRS6085_08000) mscT 1509146..1509949 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP57_RS08020 (NRS6085_08005) ahpA 1510186..1510728 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP57_RS08025 (NRS6085_08010) ykuV 1510799..1511245 (+) 447 WP_047182550.1 thiol-disulfide oxidoreductase YkuV -
  KJP57_RS08030 (NRS6085_08015) rok 1511711..1512286 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP57_RS08035 (NRS6085_08020) cse15 1512327..1513292 (-) 966 WP_076457764.1 spore protein Cse15 -
  KJP57_RS08040 (NRS6085_08025) mobA 1513429..1514028 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  KJP57_RS08045 (NRS6085_08030) moeB 1514079..1515098 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP57_RS08050 (NRS6085_08035) glp 1515116..1516408 (+) 1293 WP_076457763.1 gephyrin-like molybdotransferase Glp -
  KJP57_RS08055 (NRS6085_08040) mobB 1516369..1516890 (+) 522 WP_064671333.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157492 KJP57_RS08030 WP_003232378.1 1511711..1512286(+) (rok) [Bacillus subtilis isolate NRS6085]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157492 KJP57_RS08030 WP_003232378.1 1511711..1512286(+) (rok) [Bacillus subtilis isolate NRS6085]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment