Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   OOL12_RS00455 Genome accession   NZ_OX344719
Coordinates   82560..83603 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain ST20190863 isolate ST20190863     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 77560..88603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOL12_RS00425 - 77871..77981 (+) 111 WP_001790257.1 hypothetical protein -
  OOL12_RS00430 - 78010..78423 (+) 414 WP_078162883.1 hypothetical protein -
  OOL12_RS00435 - 78913..79899 (-) 987 WP_000999713.1 FUSC family protein -
  OOL12_RS00440 map 80486..81244 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  OOL12_RS00445 - 81461..81847 (+) 387 WP_001110179.1 hypothetical protein -
  OOL12_RS00450 liaF 81862..82563 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  OOL12_RS00455 vraS 82560..83603 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  OOL12_RS00460 vraR 83593..84222 (+) 630 WP_264717416.1 two-component system response regulator VraR Regulator
  OOL12_RS00465 - 84338..85555 (-) 1218 WP_061732697.1 YihY/virulence factor BrkB family protein -
  OOL12_RS00470 - 85833..86108 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  OOL12_RS00475 - 86115..86579 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  OOL12_RS00480 - 86726..86926 (+) 201 WP_000180461.1 DUF1128 family protein -
  OOL12_RS00485 - 86929..88185 (+) 1257 WP_001795438.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1154813 OOL12_RS00455 WP_001017131.1 82560..83603(+) (vraS) [Staphylococcus aureus strain ST20190863 isolate ST20190863]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1154813 OOL12_RS00455 WP_001017131.1 82560..83603(+) (vraS) [Staphylococcus aureus strain ST20190863 isolate ST20190863]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment