Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   DQN71_RS08725 Genome accession   NZ_LS483471
Coordinates   1657147..1659018 (-) Length   623 a.a.
NCBI ID   WP_111694580.1    Uniprot ID   -
Organism   Streptococcus cristatus strain NCTC13807     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1652147..1664018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS08705 (NCTC13807_01660) - 1654597..1654896 (-) 300 WP_015605605.1 YlxQ-related RNA-binding protein -
  DQN71_RS08710 (NCTC13807_01661) rnpM 1654889..1655185 (-) 297 WP_015605606.1 RNase P modulator RnpM -
  DQN71_RS08715 (NCTC13807_01662) nusA 1655197..1656447 (-) 1251 WP_172456451.1 transcription termination factor NusA -
  DQN71_RS08720 (NCTC13807_01663) rimP 1656509..1656997 (-) 489 WP_041826911.1 ribosome maturation factor RimP -
  DQN71_RS08725 (NCTC13807_01664) stkP 1657147..1659018 (-) 1872 WP_111694580.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  DQN71_RS08730 (NCTC13807_01665) - 1659015..1659755 (-) 741 WP_015605610.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  DQN71_RS08735 (NCTC13807_01666) rsmB 1659777..1661090 (-) 1314 WP_172456452.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  DQN71_RS08740 (NCTC13807_01667) fmt 1661080..1662018 (-) 939 WP_041826831.1 methionyl-tRNA formyltransferase -

Sequence

Protein


Download         Length: 623 a.a.        Molecular weight: 67995.15 Da        Isoelectric Point: 7.0824

>NTDB_id=1142330 DQN71_RS08725 WP_111694580.1 1657147..1659018(-) (stkP) [Streptococcus cristatus strain NCTC13807]
MIQIGKIFAGRYKIIKQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDPIAVARFQREAKAMADLDHPYIVRISDIG
EEDGQQYLAMEYVSGLDLKRYIKENSPLSNEEAVRIMGQILLAMRLAHTRGIVHRDLKPQNVLLTPDGNAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIIAENPNVP
QALENVVIKATAKKLSDCYQSVAEMYVDLSSSLSYDRRNEKKLVFDDGAKADTKTLPKVPPVPQSAPSPVAEAVAPKVAA
DVKRETPVLKAPVKKPKKRHLRARYKVMFLAILLVFAAFFFLLYKSPANTTVPDVAGQTVAEARSTITAKGLEVGEIKED
YSDNVAEGKVIKTDPPVNSQRRENSKVDLIVSKGSKTFTVENYVGQKSSEAVEHLKSTYNIPEKLIKIVEEENSDVEEGV
VISQTPAAGSSYDVTSNKQITLTVAKTVTRVEMPDFGHLQVSYAYARAYLMEMGISASRIERVIDRSVESSQADLVTSQS
PAAGQSIKLKSNTKITFYVTDGTVTSSSSSSERTQPSSSSSSTSEEESHSSSSSSSTTASTSH

Nucleotide


Download         Length: 1872 bp        

>NTDB_id=1142330 DQN71_RS08725 WP_111694580.1 1657147..1659018(-) (stkP) [Streptococcus cristatus strain NCTC13807]
ATGATTCAAATCGGCAAGATCTTTGCCGGGCGATATAAAATCATCAAGCAGATTGGCCGCGGAGGCATGGCCGATGTCTA
TCTGGCACGAGATCTGATACTTGATGGTGAGGAAGTTGCTGTAAAGGTTCTTAGAACCAATTATCAGACGGATCCGATTG
CAGTTGCTCGCTTCCAGAGAGAAGCCAAAGCGATGGCGGACTTGGATCATCCTTACATTGTCCGGATTTCCGATATTGGA
GAAGAAGATGGCCAGCAGTATCTGGCTATGGAATACGTGTCTGGGCTTGACCTCAAACGCTATATCAAAGAAAATTCTCC
ACTTTCAAATGAAGAAGCAGTCCGAATCATGGGACAAATCCTACTAGCTATGCGTTTAGCGCATACACGCGGGATTGTCC
ATCGTGACTTAAAACCCCAAAACGTTCTCTTGACGCCAGATGGCAATGCCAAGGTAACAGACTTTGGAATTGCCGTGGCT
TTCGCAGAGACCAGCCTGACCCAGACCAATTCGATGCTGGGGTCGGTGCATTATCTTTCGCCAGAACAGGCGCGTGGCTC
TAAAGCCACTGTTCAGAGCGACATTTATGCCATGGGGATTATTTTCTACGAGATGCTGACAGGGCATATCCCTTATGACG
GAGATAGTGCTGTAACAATTGCCTTGCAGCATTTCCAAAAGCCCCTGCCGTCAATCATCGCAGAAAATCCGAATGTCCCT
CAGGCCTTGGAAAATGTGGTCATTAAGGCGACGGCTAAAAAGCTGAGCGATTGCTATCAGTCCGTTGCGGAGATGTATGT
TGACTTGTCTAGCAGCTTATCCTATGACCGCCGAAATGAAAAGAAACTGGTCTTTGATGATGGAGCCAAGGCAGATACTA
AAACTCTGCCAAAAGTTCCTCCGGTTCCTCAGTCAGCTCCAAGCCCTGTCGCAGAAGCAGTGGCGCCTAAAGTTGCGGCT
GATGTGAAGAGAGAGACTCCCGTTTTGAAGGCTCCAGTCAAGAAGCCGAAAAAACGCCATTTGAGAGCTAGATACAAGGT
TATGTTCTTAGCCATTCTCTTGGTTTTTGCAGCCTTCTTCTTCTTGCTCTATAAAAGTCCTGCCAATACTACGGTACCAG
ATGTAGCAGGTCAAACAGTGGCGGAAGCCCGTTCGACCATTACTGCTAAAGGCCTCGAAGTAGGGGAAATCAAAGAAGAC
TACAGTGATAATGTGGCAGAAGGCAAGGTCATCAAGACTGATCCGCCAGTAAATAGCCAGCGTCGGGAAAATAGTAAGGT
GGATTTGATTGTATCTAAAGGTTCAAAAACCTTTACGGTAGAAAACTATGTTGGTCAAAAATCTTCTGAAGCGGTCGAAC
ATCTGAAGAGCACTTACAATATCCCTGAAAAGCTAATCAAGATTGTAGAAGAAGAAAATTCTGATGTTGAAGAGGGAGTT
GTTATCAGCCAGACACCGGCTGCAGGTTCTTCTTACGATGTGACATCAAACAAACAGATTACCCTGACGGTTGCTAAAAC
GGTAACTAGAGTTGAAATGCCTGACTTTGGCCATCTCCAAGTTTCCTATGCTTATGCACGGGCCTATCTGATGGAGATGG
GAATTTCTGCGTCTCGAATCGAGCGTGTTATCGATCGTTCTGTAGAGTCAAGTCAAGCTGATTTGGTGACATCCCAGTCT
CCAGCAGCTGGACAAAGTATCAAATTGAAATCAAATACCAAGATTACTTTCTACGTAACAGATGGCACAGTCACTAGCTC
TTCTAGTTCAAGTGAGCGAACACAACCATCATCTTCTTCAAGCAGCACGAGTGAGGAGGAAAGTCACTCGAGCTCTTCGA
GCAGCTCTACAACTGCATCGACGAGCCATTAA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(12-227)

PASTA domain (PASTA)

(439-506)

PASTA domain (PASTA)

(511-580)

PASTA domain (PASTA)

(371-433)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

67.871

84.43

0.573
  stkP Streptococcus pneumoniae D39

67.49

84.43

0.57
  stkP Streptococcus pneumoniae R6

67.49

84.43

0.57
  stkP Streptococcus pneumoniae Rx1

67.3

84.43

0.568
  stkP/pknB Streptococcus salivarius strain HSISS4

54.147

100

0.555
  pknB Streptococcus mutans UA159

56.537

94.543

0.535

Multiple sequence alignment