Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | DQM48_RS02685 | Genome accession | NZ_LS483348 |
| Coordinates | 489724..492009 (-) | Length | 761 a.a. |
| NCBI ID | WP_020916383.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC8738 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 484724..497009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM48_RS02670 (NCTC8738_00545) | ileS | 485817..488615 (+) | 2799 | WP_111698313.1 | isoleucine--tRNA ligase | - |
| DQM48_RS02675 (NCTC8738_00546) | - | 488702..489004 (-) | 303 | WP_020916381.1 | DUF1827 family protein | - |
| DQM48_RS02680 (NCTC8738_00547) | - | 489076..489522 (-) | 447 | WP_058833190.1 | NUDIX hydrolase | - |
| DQM48_RS02685 (NCTC8738_00548) | clpE | 489724..492009 (-) | 2286 | WP_020916383.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DQM48_RS02695 | - | 492397..493748 (+) | 1352 | Protein_457 | IS3 family transposase | - |
| DQM48_RS02700 (NCTC8738_00552) | - | 493701..494177 (-) | 477 | WP_250317106.1 | DUF3278 domain-containing protein | - |
| DQM48_RS02705 (NCTC8738_00553) | - | 494156..494353 (-) | 198 | WP_058813719.1 | helix-turn-helix transcriptional regulator | - |
| DQM48_RS02710 (NCTC8738_00554) | argF | 494528..495508 (+) | 981 | WP_111699176.1 | ornithine carbamoyltransferase | - |
| DQM48_RS02715 (NCTC8738_00555) | - | 495626..495856 (+) | 231 | WP_004230761.1 | DUF1797 family protein | - |
| DQM48_RS02720 (NCTC8738_00556) | - | 496168..496854 (+) | 687 | WP_061407326.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 761 a.a. Molecular weight: 84659.68 Da Isoelectric Point: 4.9481
>NTDB_id=1137818 DQM48_RS02685 WP_020916383.1 489724..492009(-) (clpE) [Streptococcus lutetiensis strain NCTC8738]
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNAILGGIGGNPQSSSNQTNQSSNPFDDFFNNLSGFPAFG
SQGFQNTPPTQSGEGNNNGRGGNGNNNFRPNGPAQQEPKGLLEEFGINVTDIARRGDIDPVIGRDAEIVRVIEILNRRTK
NNPVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEI
HEIVGAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDY
HHVKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVQAENLKNQATREEDYERAAYFR
DQIAKYKEMQKQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLIHLADDLKEHVIGQDEAVDKIAKAIRRNRI
GLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRN
PYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGQLGDF
FSPEFMNRFDGIIEFKALSKDNLLHIVNLMLDDVNNRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDA
ITDFYLEHPTEKDLKAVMTSNGKIIIKSAKKVEKEETVSAE
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNAILGGIGGNPQSSSNQTNQSSNPFDDFFNNLSGFPAFG
SQGFQNTPPTQSGEGNNNGRGGNGNNNFRPNGPAQQEPKGLLEEFGINVTDIARRGDIDPVIGRDAEIVRVIEILNRRTK
NNPVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEI
HEIVGAGNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDY
HHVKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLVQAENLKNQATREEDYERAAYFR
DQIAKYKEMQKQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLIHLADDLKEHVIGQDEAVDKIAKAIRRNRI
GLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRN
PYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGQLGDF
FSPEFMNRFDGIIEFKALSKDNLLHIVNLMLDDVNNRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDA
ITDFYLEHPTEKDLKAVMTSNGKIIIKSAKKVEKEETVSAE
Nucleotide
Download Length: 2286 bp
>NTDB_id=1137818 DQM48_RS02685 WP_020916383.1 489724..492009(-) (clpE) [Streptococcus lutetiensis strain NCTC8738]
ATGCTCTGTCAAAATTGTCATTTAAATGAATCTACTATTCACCTGTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCAAATAACGCTATTTTAGGAGGAATAGGAGGTAATCCTCAAT
CATCTTCTAACCAAACAAACCAATCATCGAACCCTTTCGACGATTTCTTTAATAATCTCAGCGGCTTCCCAGCATTTGGT
AGCCAAGGATTCCAAAATACTCCTCCAACTCAATCTGGTGAAGGTAATAATAACGGACGCGGTGGCAATGGCAACAACAA
TTTCCGCCCAAACGGACCAGCACAACAAGAACCTAAGGGCTTGCTAGAAGAATTTGGTATCAATGTTACTGATATCGCAC
GTCGTGGTGATATCGACCCTGTCATCGGACGTGATGCTGAAATTGTTCGTGTTATCGAAATTCTTAACCGCCGTACAAAA
AACAATCCTGTTCTTATCGGAGAACCTGGTGTTGGTAAAACTGCCGTTGTTGAAGGATTAGCACAAAAAATTGTAGACGG
TAACGTTCCACAAAAACTCCAAAATAAACAAGTTATCCGCCTAGATGTGGTAAGTCTTGTTCAAGGAACTGGTATTCGTG
GTCAATTTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGCAAAGACGTTATCCTCTTCATCGATGAAATC
CACGAAATTGTCGGTGCTGGTAATGCTGGTGACGGTAACATGGATGCTGGTAACATCTTGAAACCCGCTCTTGCTCGTGG
TGAGCTACAATTAGTTGGTGCAACTACTTTGAACGAATACCGCATCATTGAAAAAGATGCTGCGCTTGAACGTCGTATGC
AACCTGTAAAAGTTGACGAACCAAGCGTCGAAGAAACTATCACTATTCTTCGTGGTATTCAAAAGAAATATGAAGATTAT
CACCATGTCAAGTACAGTGATGATGCTATCGAAGCTGCTGCTAACCTCTCAAATCGCTACATTCAAGACCGTTTCCTTCC
AGATAAAGCTATCGACCTTCTCGATGAAGCTGGTTCTAAGATGAACTTGACACTTAACTTTGTTGATCCAAAAGAAATTG
ACAAACGTTTGGTGCAAGCTGAAAATCTAAAAAATCAAGCTACTCGTGAAGAAGATTATGAACGCGCAGCTTATTTTCGT
GATCAAATCGCTAAATACAAGGAAATGCAAAAACAAACCATCAACGAAGATGATATTCCAGTGATTACTGAAAAGACCAT
CGAGGCAATCGTTGAAGAAAAAACAAATATTCCTGTTGGTGACTTGAAAGAAAAAGAACAATCTCAATTAATTCACCTTG
CTGATGACTTGAAAGAACACGTTATTGGTCAAGACGAAGCTGTTGATAAGATTGCAAAAGCCATCCGTCGTAACCGTATT
GGTCTTGGTACACCAAACCGTCCAATTGGTTCATTCCTCTTCGTCGGTCCTACTGGTGTTGGTAAAACAGAACTTTCAAA
ACAACTTGCTATTGAACTCTTCGGCTCAGCTGATAGCATGATCCGCTTTGACATGTCTGAATACATGGAAAAACATGCAG
TCGCTAAACTTGTCGGAGCCCCTCCAGGATATGTTGGTTACGAAGAAGCTGGTCAATTGACTGAAAAAGTTCGTCGAAAC
CCATACTCACTTATCTTGCTTGATGAAGTTGAAAAGGCACACCCTGATGTCATGCACATGTTCTTGCAAGTTCTTGATGA
TGGTCGTTTAACTGACGGTCAAGGACGTACTGTAAGCTTTAAAGATACAATCATCATTATGACATCTAACGCTGGTACTG
GCAAAGTTGAAGCTTCTGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTTCTTGGTCAACTTGGAGACTTC
TTTAGCCCTGAATTCATGAACCGTTTTGACGGTATTATCGAATTCAAAGCCCTAAGCAAAGATAATCTCCTTCATATCGT
TAACCTCATGCTTGACGACGTCAATAACCGTTTGGCAACTAACGATATTCACCTTGAAGTAACAGATAAAGTTAAAGAAA
AACTGGTTGACCTTGGATATGATCCTAAGATGGGTGCTCGTCCACTTCGTCGTACTATCCAAGATCACATCGAAGATGCT
ATTACAGACTTCTACCTTGAACACCCAACTGAAAAAGATTTGAAAGCTGTGATGACAAGCAATGGCAAAATCATCATCAA
ATCAGCTAAAAAAGTTGAAAAAGAAGAAACTGTTTCAGCAGAATAA
ATGCTCTGTCAAAATTGTCATTTAAATGAATCTACTATTCACCTGTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCAAATAACGCTATTTTAGGAGGAATAGGAGGTAATCCTCAAT
CATCTTCTAACCAAACAAACCAATCATCGAACCCTTTCGACGATTTCTTTAATAATCTCAGCGGCTTCCCAGCATTTGGT
AGCCAAGGATTCCAAAATACTCCTCCAACTCAATCTGGTGAAGGTAATAATAACGGACGCGGTGGCAATGGCAACAACAA
TTTCCGCCCAAACGGACCAGCACAACAAGAACCTAAGGGCTTGCTAGAAGAATTTGGTATCAATGTTACTGATATCGCAC
GTCGTGGTGATATCGACCCTGTCATCGGACGTGATGCTGAAATTGTTCGTGTTATCGAAATTCTTAACCGCCGTACAAAA
AACAATCCTGTTCTTATCGGAGAACCTGGTGTTGGTAAAACTGCCGTTGTTGAAGGATTAGCACAAAAAATTGTAGACGG
TAACGTTCCACAAAAACTCCAAAATAAACAAGTTATCCGCCTAGATGTGGTAAGTCTTGTTCAAGGAACTGGTATTCGTG
GTCAATTTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGCAAAGACGTTATCCTCTTCATCGATGAAATC
CACGAAATTGTCGGTGCTGGTAATGCTGGTGACGGTAACATGGATGCTGGTAACATCTTGAAACCCGCTCTTGCTCGTGG
TGAGCTACAATTAGTTGGTGCAACTACTTTGAACGAATACCGCATCATTGAAAAAGATGCTGCGCTTGAACGTCGTATGC
AACCTGTAAAAGTTGACGAACCAAGCGTCGAAGAAACTATCACTATTCTTCGTGGTATTCAAAAGAAATATGAAGATTAT
CACCATGTCAAGTACAGTGATGATGCTATCGAAGCTGCTGCTAACCTCTCAAATCGCTACATTCAAGACCGTTTCCTTCC
AGATAAAGCTATCGACCTTCTCGATGAAGCTGGTTCTAAGATGAACTTGACACTTAACTTTGTTGATCCAAAAGAAATTG
ACAAACGTTTGGTGCAAGCTGAAAATCTAAAAAATCAAGCTACTCGTGAAGAAGATTATGAACGCGCAGCTTATTTTCGT
GATCAAATCGCTAAATACAAGGAAATGCAAAAACAAACCATCAACGAAGATGATATTCCAGTGATTACTGAAAAGACCAT
CGAGGCAATCGTTGAAGAAAAAACAAATATTCCTGTTGGTGACTTGAAAGAAAAAGAACAATCTCAATTAATTCACCTTG
CTGATGACTTGAAAGAACACGTTATTGGTCAAGACGAAGCTGTTGATAAGATTGCAAAAGCCATCCGTCGTAACCGTATT
GGTCTTGGTACACCAAACCGTCCAATTGGTTCATTCCTCTTCGTCGGTCCTACTGGTGTTGGTAAAACAGAACTTTCAAA
ACAACTTGCTATTGAACTCTTCGGCTCAGCTGATAGCATGATCCGCTTTGACATGTCTGAATACATGGAAAAACATGCAG
TCGCTAAACTTGTCGGAGCCCCTCCAGGATATGTTGGTTACGAAGAAGCTGGTCAATTGACTGAAAAAGTTCGTCGAAAC
CCATACTCACTTATCTTGCTTGATGAAGTTGAAAAGGCACACCCTGATGTCATGCACATGTTCTTGCAAGTTCTTGATGA
TGGTCGTTTAACTGACGGTCAAGGACGTACTGTAAGCTTTAAAGATACAATCATCATTATGACATCTAACGCTGGTACTG
GCAAAGTTGAAGCTTCTGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTTCTTGGTCAACTTGGAGACTTC
TTTAGCCCTGAATTCATGAACCGTTTTGACGGTATTATCGAATTCAAAGCCCTAAGCAAAGATAATCTCCTTCATATCGT
TAACCTCATGCTTGACGACGTCAATAACCGTTTGGCAACTAACGATATTCACCTTGAAGTAACAGATAAAGTTAAAGAAA
AACTGGTTGACCTTGGATATGATCCTAAGATGGGTGCTCGTCCACTTCGTCGTACTATCCAAGATCACATCGAAGATGCT
ATTACAGACTTCTACCTTGAACACCCAACTGAAAAAGATTTGAAAGCTGTGATGACAAGCAATGGCAAAATCATCATCAA
ATCAGCTAAAAAAGTTGAAAAAGAAGAAACTGTTTCAGCAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
84.881 |
99.08 |
0.841 |
| clpE | Streptococcus pneumoniae Rx1 |
83.134 |
98.949 |
0.823 |
| clpE | Streptococcus pneumoniae D39 |
83.134 |
98.949 |
0.823 |
| clpE | Streptococcus pneumoniae R6 |
83.134 |
98.949 |
0.823 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.134 |
98.949 |
0.823 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.135 |
100 |
0.771 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.963 |
88.699 |
0.452 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.402 |
83.443 |
0.396 |
| clpC | Streptococcus pneumoniae Rx1 |
47.756 |
81.997 |
0.392 |
| clpC | Streptococcus pneumoniae D39 |
47.756 |
81.997 |
0.392 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.596 |
81.997 |
0.39 |
| clpC | Streptococcus mutans UA159 |
47.087 |
81.209 |
0.382 |
| clpC | Streptococcus thermophilus LMD-9 |
45.298 |
83.837 |
0.38 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.984 |
83.837 |
0.377 |