Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQL34_RS11185 Genome accession   NZ_LS483339
Coordinates   2101266..2102033 (+) Length   255 a.a.
NCBI ID   WP_111679767.1    Uniprot ID   A0A2X3WQS8
Organism   Streptococcus thermophilus strain NCTC12958     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2096266..2107033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL34_RS11170 (NCTC12958_02365) - 2098582..2099265 (-) 684 WP_111679765.1 YoaK family protein -
  DQL34_RS11175 (NCTC12958_02366) rlmH 2099281..2099760 (-) 480 WP_084829195.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL34_RS11180 (NCTC12958_02367) htrA 2099965..2101200 (+) 1236 WP_111679766.1 S1C family serine protease Regulator
  DQL34_RS11185 (NCTC12958_02368) spo0J 2101266..2102033 (+) 768 WP_111679767.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29475.86 Da        Isoelectric Point: 9.6649

>NTDB_id=1137394 DQL34_RS11185 WP_111679767.1 2101266..2102033(+) (spo0J) [Streptococcus thermophilus strain NCTC12958]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1137394 DQL34_RS11185 WP_111679767.1 2101266..2102033(+) (spo0J) [Streptococcus thermophilus strain NCTC12958]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3WQS8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569


Multiple sequence alignment