Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FGK99_RS07100 Genome accession   NZ_LR594033
Coordinates   1499171..1500172 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC4675     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494171..1505172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK99_RS07085 (NCTC4675_01438) - 1494995..1496329 (-) 1335 WP_043052263.1 glycosyltransferase family 4 protein -
  FGK99_RS07090 (NCTC4675_01439) - 1496331..1497329 (-) 999 WP_126436925.1 glycosyltransferase family 4 protein -
  FGK99_RS07095 (NCTC4675_01440) - 1497626..1499101 (-) 1476 WP_138119583.1 alpha-amylase -
  FGK99_RS07100 (NCTC4675_01441) ccpA 1499171..1500172 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  FGK99_RS07105 (NCTC4675_01442) - 1500346..1501431 (+) 1086 WP_138119585.1 M24 family metallopeptidase -
  FGK99_RS07110 (NCTC4675_01443) - 1501605..1503188 (-) 1584 WP_138119587.1 ABC transporter ATP-binding protein -
  FGK99_RS10155 (NCTC4675_01444) - 1503212..1503346 (-) 135 WP_282957526.1 hypothetical protein -
  FGK99_RS07115 (NCTC4675_01445) - 1503426..1504277 (+) 852 WP_138119589.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=1127188 FGK99_RS07100 WP_012516008.1 1499171..1500172(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1127188 FGK99_RS07100 WP_012516008.1 1499171..1500172(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAACGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTGGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment